C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: two pore segment channel 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294309 TPCN2-001 ENSG00000162341 9606 + 11:69048897-69088524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294309
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294309 1.125±0.00 3.517±0.00 0.273±0.00 1.806±0.00 0.330±0.19 0.625±0.00 3.420±0.00 0.576±0.00 1.191±0.00 0.485±0.00 3.268±0.86 2.802±0.31 1.781±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SN CIL_0007SN_0001 VISTA 11:68986730-69588911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 ISS voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005765 IDA lysosomal membrane
GO:0005886 IBA plasma membrane
GO:0006811 IEA ion transport
GO:0006816 IBA calcium ion transport
GO:0006874 IDA cellular calcium ion homeostasis
GO:0006939 ISS smooth muscle contraction
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019901 IPI protein kinase binding
GO:0034220 IBA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042802 IPI identical protein binding
GO:0051209 IEA release of sequestered calcium ion into cytosol
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport
GO:0072345 IDA NAADP-sensitive calcium-release channel activity
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058022 Tpcn2-201 protein_coding Mus_musculus 0 1568

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