C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007SN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2073 VISTA 9606 11:68986730-69588911
GeneTranscriptPositionBiotype
ENSG00000162341 (TPCN2)
two pore segment channel 2 		ENST00000294309 (TPCN2-001) 69048897-69088524 protein_coding
ENST00000442692 (TPCN2-005) 69055162-69090604 processed_transcript
ENST00000534832 (TPCN2-006) 69049030-69054390 processed_transcript
ENST00000535009 (TPCN2-004) 69048934-69079847 retained_intron
ENST00000542467 (TPCN2-003) 69048961-69088203 protein_coding
ENSG00000172927 (MYEOV)
myeloma overexpressed 		ENST00000308946 (MYEOV-004) 69294155-69297287 protein_coding
ENST00000441339 (MYEOV-002) 69294138-69296885 protein_coding
ENST00000535407 (MYEOV-001) 69294158-69297287 protein_coding
ENST00000535597 (MYEOV-007) 69295586-69296171 processed_transcript
ENST00000535653 (MYEOV-003) 69294164-69297287 retained_intron
ENST00000535660 (MYEOV-011) 69316832-69341677 processed_transcript
ENST00000539691 (MYEOV-006) 69294155-69295850 processed_transcript
ENST00000540356 (MYEOV-010) 69341556-69367415 processed_transcript
ENST00000540760 (MYEOV-005) 69294174-69295662 processed_transcript
ENST00000541137 (MYEOV-012) 69337360-69367726 processed_transcript
ENST00000544008 (MYEOV-008) 69294151-69341682 processed_transcript
ENST00000544781 (MYEOV-009) 69299274-69367003 retained_intron
ENSG00000172935 (MRGPRF)
MAS-related GPR, member F 		ENST00000309099 (MRGPRF-001) 69004398-69013409 protein_coding
ENST00000320913 (MRGPRF-002) 69009417-69013246 protein_coding
ENST00000441623 (MRGPRF-201) 69004395-69013382 protein_coding
ENSG00000213275 (IFITM9P)
interferon induced transmembrane protein 9 pseudogene 		ENST00000535743 (IFITM9P-001) 69303412-69303807 processed_pseudogene
ENSG00000255774 (AP000439.3)
 ENST00000542064 (AP000439.3-001) 69477133-69479940 lincRNA
ENSG00000255980 (AP000439.1)
 ENST00000545202 (AP000439.1-001) 69425690-69429621 lincRNA
ENSG00000259799 (RP11-554A11.9)
 ENST00000565145 (RP11-554A11.9-001) 69155910-69159740 antisense
ENST00000568942 (RP11-554A11.9-002) 69159086-69159752 antisense
ENSG00000259854 (RP11-211G23.1)
 ENST00000562341 (RP11-211G23.1-001) 69414307-69416832 lincRNA
ENSG00000260877 (RP11-211G23.2)
 ENST00000561588 (RP11-211G23.2-001) 69371463-69372511 lincRNA
ENSG00000260895 (RP11-554A11.7)
 ENST00000567925 (RP11-554A11.7-001) 69103493-69109094 lincRNA
ENSG00000261070 (RP11-554A11.8)
 ENST00000562772 (RP11-554A11.8-001) 69147228-69171564 lincRNA
ENSG00000261347 (AP000439.5)
 ENST00000567742 (AP000439.5-001) 69467598-69469705 lincRNA
ENSG00000261625 (RP11-554A11.4)
 ENST00000562276 (RP11-554A11.4-001) 69000765-69002048 sense_overlapping
CIL_0007SN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2073 VISTA 10090 7:144817158-145418950
GeneTranscriptPositionBiotype
ENSMUSG00000031070 (Mrgprf)
MAS-related GPR, member F 		ENSMUST00000033386 (Mrgprf-001) 145300828-145309557 protein_coding
ENSMUST00000117718 (Mrgprf-002) 145300899-145309349 protein_coding
ENSMUSG00000031072 (Oraov1)
oral cancer overexpressed 1 		ENSMUST00000033388 (Oraov1-001) 144915135-144921134 protein_coding
ENSMUST00000093964 (Oraov1-003) 144915171-144917701 retained_intron
ENSMUST00000105895 (Oraov1-006) 144915180-144929495 protein_coding
ENSMUST00000128057 (Oraov1-002) 144915100-144930748 protein_coding
ENSMUST00000141737 (Oraov1-004) 144915173-144916457 processed_transcript
ENSMUST00000147460 (Oraov1-005) 144916136-144919829 retained_intron
ENSMUSG00000031073 (Fgf15)
fibroblast growth factor 15 		ENSMUST00000033389 (Fgf15-201) 144896532-144900953 protein_coding
ENSMUSG00000031074 (Fgf3)
fibroblast growth factor 3 		ENSMUST00000105898 (Fgf3-001) 144838595-144844436 protein_coding
ENSMUST00000155320 (Fgf3-002) 144838083-144842719 protein_coding
ENSMUSG00000048677 (Tpcn2)
two pore segment channel 2 		ENSMUST00000058022 (Tpcn2-201) 145253923-145283927 protein_coding
ENSMUSG00000050917 (Fgf4)
fibroblast growth factor 4 		ENSMUST00000060336 (Fgf4-201) 144861386-144865243 protein_coding
ENSMUSG00000051207 (Mrgprd)
MAS-related GPR, member D 		ENSMUST00000062163 (Mrgprd-201) 145314835-145324059 protein_coding
ENSMUSG00000070348 (Ccnd1)
cyclin D1 		ENSMUST00000093962 (Ccnd1-001) 144929931-144939869 protein_coding
ENSMUST00000135985 (Ccnd1-002) 144937295-144938197 retained_intron
ENSMUSG00000096999 (Gm26793)
predicted gene, 26793 		ENSMUST00000180930 (Gm26793-201) 144894560-144897461 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SN_0001ENSG00000162341ENST00000294309ENST00000442692ENST00000534832ENST00000535009ENST00000542467ENSG00000172927ENST00000308946ENST00000441339ENST00000535407ENST00000535597ENST00000535653ENST00000535660ENST00000539691ENST00000540356ENST00000540760ENST00000541137ENST00000544008ENST00000544781ENSG00000172935ENST00000309099ENST00000320913ENST00000441623ENSG00000213275ENST00000535743ENSG00000255774ENST00000542064ENSG00000255980ENST00000545202ENSG00000259799ENST00000565145ENST00000568942ENSG00000259854ENST00000562341ENSG00000260877ENST00000561588ENSG00000260895ENST00000567925ENSG00000261070ENST00000562772ENSG00000261347ENST00000567742ENSG00000261625ENST00000562276CIL_0007SN_0002ENSMUSG00000031070ENSMUST00000033386ENSMUST00000117718ENSMUSG00000031072ENSMUST00000033388ENSMUST00000093964ENSMUST00000105895ENSMUST00000128057ENSMUST00000141737ENSMUST00000147460ENSMUSG00000031073ENSMUST00000033389ENSMUSG00000031074ENSMUST00000105898ENSMUST00000155320ENSMUSG00000048677ENSMUST00000058022ENSMUSG00000050917ENSMUST00000060336ENSMUSG00000051207ENSMUST00000062163ENSMUSG00000070348ENSMUST00000093962ENSMUST00000135985ENSMUSG00000096999ENSMUST00000180930
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162341 ENST00000294309 1.125±0.00 3.517±0.00 N/A 0.273±0.00 1.806±0.00 0.330±0.19 0.625±0.00 3.420±0.00 0.576±0.00 1.191±0.00 0.485±0.00 3.268±0.86 2.802±0.31 1.781±0.76
ENST00000442692 0.537±0.00 0.737±0.00 N/A 0.237±0.00 1.334±0.00 N/A 0.596±0.00 1.760±0.00 N/A N/A 0.201±0.00 0.727±0.48 0.746±0.00 0.985±0.48
ENST00000534832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542467 N/A N/A N/A 0.837±0.00 N/A 0.533±0.00 N/A 0.365±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000172927 ENST00000308946 0.714±0.00 N/A N/A N/A 11.552±0.00 0.093±0.00 N/A N/A 0.753±0.00 N/A N/A 0.231±0.00 0.066±0.04 N/A
ENST00000441339 0.305±0.00 N/A N/A 0.013±0.00 N/A N/A 0.012±0.00 0.120±0.00 N/A 0.085±0.00 N/A 0.153±0.14 N/A 0.120±0.00
ENST00000535407 N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.00
ENST00000535653 0.356±0.00 N/A N/A N/A 8.670±0.00 0.304±0.00 N/A N/A 0.757±0.00 N/A N/A 0.667±0.00 N/A N/A
ENST00000535660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539691 N/A 0.161±0.00 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000540356 N/A 0.155±0.00 N/A 0.042±0.00 N/A N/A 0.071±0.00 0.077±0.00 N/A N/A N/A 0.068±0.00 N/A N/A
ENST00000540760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00
ENST00000541137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.05
ENST00000544008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A
ENSG00000172935 ENST00000309099 18.282±0.00 41.777±0.00 N/A 0.790±0.00 11.082±8.49 23.203±20.90 0.864±0.64 9.377±0.00 5.531±4.49 8.659±7.83 3.569±0.00 22.769±22.94 15.635±6.70 39.256±0.00
ENST00000320913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441623 N/A N/A 0.624±0.00 0.116±0.00 N/A 11.158±0.00 N/A 0.879±0.00 N/A N/A 1.665±0.00 N/A N/A 2.541±0.00
ENSG00000213275 ENST00000535743 0.281±0.00 0.297±0.00 N/A N/A 0.084±0.00 0.076±0.00 0.070±0.00 0.258±0.02 0.467±0.00 0.434±0.00 0.064±0.00 0.119±0.00 N/A 0.494±0.00
ENSG00000255774 ENST00000542064 N/A N/A N/A N/A 0.414±0.31 1.665±1.19 N/A N/A 0.202±0.00 N/A N/A 0.501±0.29 N/A 0.028±0.00
ENSG00000255980 ENST00000545202 N/A 0.023±0.00 N/A 0.097±0.08 0.016±0.00 N/A N/A N/A 0.035±0.00 N/A N/A 0.023±0.00 0.582±0.12 0.080±0.06
ENSG00000259799 ENST00000565145 N/A 0.103±0.00 N/A N/A N/A 0.242±0.00 0.095±0.00 N/A N/A N/A N/A N/A 0.154±0.00 N/A
ENST00000568942 N/A 0.274±0.00 0.100±0.00 0.264±0.00 N/A N/A N/A 0.421±0.00 N/A N/A N/A 0.237±0.00 N/A 0.337±0.00
ENSG00000259854 ENST00000562341 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000260877 ENST00000561588 0.195±0.00 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 0.791±0.00 N/A
ENSG00000260895 ENST00000567925 N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A 0.092±0.05 N/A 0.049±0.00
ENSG00000261070 ENST00000562772 0.014±0.00 0.015±0.00 N/A 0.064±0.00 N/A 0.153±0.00 N/A N/A 0.066±0.00 N/A N/A 0.060±0.00 0.057±0.00 0.037±0.01
ENSG00000261347 ENST00000567742 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A 0.122±0.06 0.031±0.00
ENSG00000261625 ENST00000562276 1.238±0.00 4.366±0.00 0.263±0.00 0.072±0.00 1.180±0.51 1.509±1.10 0.116±0.00 0.679±0.43 0.489±0.35 0.985±0.00 0.789±0.00 1.422±1.33 0.680±0.03 2.103±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031070 ENSMUST00000033386 14.782±7.57 1.350±0.54 21.721±0.17 1.367±0.12 7.379±2.40 14.710±5.23 3.329±0.68 1.703±0.11 0.074±0.05 4.402±0.77 0.771±0.12 8.731±4.74 0.709±1.02 0.463±0.03
ENSMUST00000117718 7.810±2.61 1.668±0.74 N/A 0.193±0.00 4.612±1.56 11.023±6.66 0.962±0.53 1.088±0.61 0.121±0.09 2.278±0.13 0.751±0.58 5.388±3.05 0.118±0.00 N/A
ENSMUSG00000031072 ENSMUST00000033388 8.304±0.39 N/A 14.587±0.00 9.112±2.41 6.675±0.00 N/A 5.191±0.34 N/A 7.307±1.27 N/A 3.788±0.34 8.139±0.21 11.318±2.64 5.339±0.92
ENSMUST00000093964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.059±16.75
ENSMUST00000105895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031073 ENSMUST00000033389 N/A 0.068±0.04 N/A 9.886±1.07 N/A 0.057±0.00 N/A N/A 0.016±0.02 N/A N/A N/A 0.004±0.00 0.052±0.02
ENSMUSG00000031074 ENSMUST00000105898 0.025±0.01 0.237±0.06 N/A 1.850±1.19 0.018±0.00 0.027±0.01 N/A N/A 0.070±0.04 N/A 0.023±0.00 N/A 0.060±0.04 0.020±0.01
ENSMUST00000155320 0.050±0.01 1.264±0.39 N/A 1.410±0.48 N/A 0.119±0.03 N/A N/A N/A 0.046±0.00 N/A N/A 0.123±0.07 0.040±0.01
ENSMUSG00000048677 ENSMUST00000058022 6.826±2.25 3.715±1.24 6.645±1.93 0.726±0.23 4.965±1.75 4.500±0.86 1.572±0.35 1.696±0.44 1.317±0.49 8.355±1.33 0.358±0.18 6.943±2.42 2.124±0.64 2.645±1.76
ENSMUSG00000050917 ENSMUST00000060336 N/A N/A N/A 0.005±0.00 0.067±0.05 0.058±0.05 N/A 0.024±0.00 N/A 0.014±0.00 0.028±0.02 N/A N/A N/A
ENSMUSG00000051207 ENSMUST00000062163 0.011±0.00 N/A 0.002±0.00 N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 0.008±0.00
ENSMUSG00000070348 ENSMUST00000093962 26.693±9.70 93.122±2.94 44.934±3.37 14.767±7.72 31.387±15.35 49.600±1.28 12.495±3.16 79.215±4.38 22.897±10.24 82.638±18.27 1.636±0.28 34.934±16.51 5.699±2.65 3.519±1.08
ENSMUST00000135985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096999 ENSMUST00000180930 0.020±0.01 0.071±0.05 N/A 1.032±0.00 N/A 0.028±0.01 N/A 0.017±0.01 0.009±0.01 N/A N/A N/A N/A 0.032±0.01

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