C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM homeobox transcription factor 1, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294816 LMX1A-002 ENSG00000162761 9606 - 1:165201873-165356241 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryTestisENST00000294816
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000294816 0.039±0.00 0.047±0.00 0.049±0.04 0.252±0.00 0.094±0.00 0.012±0.00 0.104±0.09 0.012±0.00 0.023±0.01 0.317±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028003 Lmx1a-001 protein_coding Mus_musculus 0 2292
ENSMUST00000111377 Lmx1a-002 protein_coding Mus_musculus 0 2292

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