C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frizzled-related protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295113 FRZB-001 ENSG00000162998 9606 - 2:182833275-182867162 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295113
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295113 1.912±0.00 5.524±0.00 1.591±0.00 3.176±0.23 4.025±1.22 5.539±1.88 0.897±0.33 2.701±2.44 0.970±0.50 4.931±3.77 4.518±3.83 5.434±4.21 12.942±6.67 8.675±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YV CIL_0000YV_0001 CGP 2:182716041-182867162
CIL_0000YU CIL_0000YU_0001 CGP 2:182833275-183038858

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0001944 IBA vasculature development
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005737 IBA cytoplasm
GO:0007420 IBA brain development
GO:0008285 IDA negative regulation of cell proliferation
GO:0008406 IBA gonad development
GO:0010721 IEA negative regulation of cell development
GO:0014033 IEA neural crest cell differentiation
GO:0016020 TAS membrane
GO:0016055 IEA Wnt signaling pathway
GO:0017147 ISS Wnt-protein binding
GO:0030165 IBA PDZ domain binding
GO:0030178 ISS negative regulation of Wnt signaling pathway
GO:0030308 IDA negative regulation of cell growth
GO:0042472 IEA inner ear morphogenesis
GO:0042813 IBA Wnt-activated receptor activity
GO:0043065 IGI positive regulation of apoptotic process
GO:0045600 IDA positive regulation of fat cell differentiation
GO:0060029 IEA convergent extension involved in organogenesis
GO:0060056 IBA mammary gland involution
GO:0060429 IBA epithelium development
GO:0061037 IBA negative regulation of cartilage development
GO:0061053 IEA somite development
GO:0070367 IBA negative regulation of hepatocyte differentiation
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:0090103 IBA cochlea morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028389 Frzb-001 protein_coding Mus_musculus 0 1362
ENSMUST00000142459 Frzb-002 processed_transcript Mus_musculus 0 617
ENSMUST00000002883 Sfrp4-201 protein_coding Mus_musculus 0 246

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