C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295750 ABCB6-005 ENSG00000115657 9606 - 2:219209772-219218354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyMuscleOvaryPlacentaTestisENST00000295750
Transcript ID Brain Breast Kidney Muscle Ovary Placenta Testis
ENST00000295750 2.271±0.00 4.798±1.47 6.653±0.00 5.019±0.00 9.324±2.60 3.924±0.00 20.522±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006EB CIL_0006EB_0001 CGP 2:219195237-219218990
CIL_0006EA CIL_0006EA_0001 CGP 2:219209768-219229717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027396 Abcb6-001 protein_coding Mus_musculus 0 2191
ENSMUST00000160081 Abcb6-003 retained_intron Mus_musculus 0 1373
ENSMUST00000159219 Abcb6-004 retained_intron Mus_musculus 0 861
ENSMUST00000160757 Abcb6-005 retained_intron Mus_musculus 0 601
ENSMUST00000161215 Abcb6-006 protein_coding Mus_musculus 0 246

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