C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22 like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043867 Rpl22l1-201 ENSMUSG00000039221 10090 + 3:28805436-28807352 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043867 4.061±1.27 0.744±0.23 61.075±0.14 36.495±8.08 3.261±1.70 4.201±2.42 3.775±0.81 5.368±2.21 71.926±72.13 5.000±0.91 70.180±11.00 40.429±55.12 136.407±37.94 14.791±2.92

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005575 ND cellular_component
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295830 RPL22L1-001 protein_coding Homo_sapiens 0 547
ENST00000395439 RPL22P22-001 processed_pseudogene Homo_sapiens 0.000000000000008 84
ENST00000463836 RPL22L1-004 protein_coding Homo_sapiens 0 523
ENST00000466674 RPL22L1-006 protein_coding Homo_sapiens 0 527
ENST00000475836 RPL22L1-002 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000478578 RPL22L1-008 retained_intron Homo_sapiens 0 387
ENST00000494771 RPL22L1-007 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000508796 RP11-386B13.1-001 processed_pseudogene Homo_sapiens 0 268

Loading