C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small integral membrane protein 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295958 SMIM14-001 ENSG00000163683 9606 - 4:39546330-39639090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295958
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295958 6.042±0.00 1.372±0.00 7.240±4.18 8.400±3.10 7.991±2.65 0.366±0.06 10.263±2.92 5.427±0.00 1.424±0.09 1.447±0.00 3.228±1.98 2.827±1.20 6.474±3.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TX CIL_0002TX_0002 CGP 4:39498755-39639090
CIL_0002TW CIL_0002TW_0002 CGP 4:39546330-39782792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139122 Smim14-001 protein_coding Mus_musculus 0 453
ENSMUST00000135258 Smim14-006 retained_intron Mus_musculus 0 327
ENSMUST00000040532 Smim14-007 nonsense_mediated_decay Mus_musculus 7e-22 111
ENSMUST00000038014 Dnajc16-001 protein_coding Mus_musculus 0.0000000003 73
ENSMUST00000162168 Zkscan5-004 nonsense_mediated_decay Mus_musculus 0.0000000003 73
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.0004 53

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