C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005799-ENSDARG00000013505 CGP 7955 1:22071717-22097063
GeneTranscriptPositionBiotype
ENSDARG00000005799 (smim14)
small integral membrane protein 14 		ENSDART00000008201 (smim14-001) 22071717-22082402 protein_coding
ENSDART00000131979 (smim14-002) 22075374-22082356 retained_intron
ENSDART00000137567 (smim14-003) 22073030-22082319 protein_coding
ENSDARG00000013505 (ube2kb)
ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) 		ENSDART00000025770 (ube2kb-201) 22085997-22096682 protein_coding
ENSDART00000139003 (ube2kb-001) 22085711-22097063 protein_coding
CIL_0002TW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163683-ENSG00000078140 CGP 9606 4:39546330-39782792
GeneTranscriptPositionBiotype
ENSG00000078140 (UBE2K)
ubiquitin-conjugating enzyme E2K 		ENST00000261427 (UBE2K-001) 39698044-39782792 protein_coding
ENST00000438068 (UBE2K-002) 39698139-39779992 processed_transcript
ENST00000445950 (UBE2K-006) 39698176-39779983 protein_coding
ENST00000503368 (UBE2K-005) 39698163-39778710 protein_coding
ENST00000510719 (UBE2K-007) 39698328-39778633 nonsense_mediated_decay
ENST00000510934 (UBE2K-004) 39698109-39778384 protein_coding
ENST00000513231 (UBE2K-003) 39698139-39778607 processed_transcript
ENSG00000163683 (SMIM14)
small integral membrane protein 14 		ENST00000295958 (SMIM14-001) 39546330-39639090 protein_coding
ENST00000505729 (SMIM14-002) 39556427-39638902 protein_coding
ENST00000507613 (SMIM14-005) 39551839-39638845 nonsense_mediated_decay
ENST00000510628 (SMIM14-003) 39551785-39638230 processed_transcript
ENST00000511809 (SMIM14-004) 39551643-39638893 protein_coding
ENST00000512441 (SMIM14-007) 39551610-39583958 processed_transcript
ENSG00000180610 (ZBTB12P1)
zinc finger and BTB domain containing 12 pseudogene 1 		ENST00000314232 (ZBTB12P1-001) 39770081-39771371 processed_pseudogene
ENSG00000243260 (RN7SL558P)
RNA, 7SL, cytoplasmic 558, pseudogene 		ENST00000497468 (RN7SL558P-201) 39761000-39761298 misc_RNA
ENSG00000249019 (RP11-539G18.1)
 ENST00000513977 (RP11-539G18.1-001) 39713842-39714451 processed_pseudogene
ENSG00000249348 (UGDH-AS1)
UGDH antisense RNA 1 		ENST00000504032 (UGDH-AS1-001) 39528019-39594707 antisense
ENSG00000252975 (Y_RNA)
Y RNA 		ENST00000517166 (Y_RNA.1-924) 39710085-39710176 misc_RNA
ENSG00000255458 (RP11-539G18.2)
 ENST00000526807 (RP11-539G18.2-002) 39653204-39666644 lincRNA
ENST00000529094 (RP11-539G18.2-004) 39639140-39651411 lincRNA
ENST00000529314 (RP11-539G18.2-006) 39653407-39666568 lincRNA
ENST00000532680 (RP11-539G18.2-005) 39639181-39651314 lincRNA
ENST00000533736 (RP11-539G18.2-001) 39639140-39652072 lincRNA
CIL_0002TW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037822-ENSMUSG00000029203 CGP 10090 5:65446844-65598988
GeneTranscriptPositionBiotype
ENSMUSG00000029203 (Ube2k)
ubiquitin-conjugating enzyme E2K 		ENSMUST00000031105 (Ube2k-004) 65537352-65595047 nonsense_mediated_decay
ENSMUST00000122141 (Ube2k-003) 65537300-65596393 protein_coding
ENSMUST00000131873 (Ube2k-002) 65537277-65595711 processed_transcript
ENSMUST00000142407 (Ube2k-001) 65537233-65598988 protein_coding
ENSMUST00000146799 (Ube2k-005) 65591596-65595145 retained_intron
ENSMUSG00000037822 (Smim14)
small integral membrane protein 14 		ENSMUST00000040532 (Smim14-007) 65450176-65492871 nonsense_mediated_decay
ENSMUST00000121661 (Smim14-004) 65450358-65493313 protein_coding
ENSMUST00000125954 (Smim14-002) 65466350-65537128 retained_intron
ENSMUST00000135258 (Smim14-006) 65449927-65461014 retained_intron
ENSMUST00000139122 (Smim14-001) 65446844-65493051 protein_coding
ENSMUST00000144562 (Smim14-005) 65468298-65492881 retained_intron
ENSMUST00000149167 (Smim14-003) 65460558-65537184 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TW_0001ENSDARG00000005799ENSDART00000008201ENSDART00000131979ENSDART00000137567ENSDARG00000013505ENSDART00000025770ENSDART00000139003CIL_0002TW_0002ENSG00000078140ENST00000261427ENST00000438068ENST00000445950ENST00000503368ENST00000510719ENST00000510934ENST00000513231ENSG00000163683ENST00000295958ENST00000505729ENST00000507613ENST00000510628ENST00000511809ENST00000512441ENSG00000180610ENST00000314232ENSG00000243260ENST00000497468ENSG00000249019ENST00000513977ENSG00000249348ENST00000504032ENSG00000252975ENST00000517166ENSG00000255458ENST00000526807ENST00000529094ENST00000529314ENST00000532680ENST00000533736CIL_0002TW_0003ENSMUSG00000029203ENSMUST00000031105ENSMUST00000122141ENSMUST00000131873ENSMUST00000142407ENSMUST00000146799ENSMUSG00000037822ENSMUST00000040532ENSMUST00000121661ENSMUST00000125954ENSMUST00000135258ENSMUST00000139122ENSMUST00000144562ENSMUST00000149167
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TW_0001ENSDARG00000005799ENSDART00000008201ENSDARG00000013505ENSDART00000025770ENSDART00000139003CIL_0002TW_0002ENSG00000078140ENST00000261427ENST00000503368ENST00000510934ENST00000513231ENSG00000163683ENST00000295958ENST00000511809ENST00000512441ENSG00000180610ENST00000314232ENSG00000243260ENST00000497468ENSG00000249019ENST00000513977ENSG00000249348ENST00000504032ENSG00000252975ENST00000517166ENSG00000255458ENST00000526807ENST00000529094ENST00000529314ENST00000532680ENST00000533736CIL_0002TW_0003ENSMUSG00000029203ENSMUST00000031105ENSMUST00000122141ENSMUST00000131873ENSMUST00000142407ENSMUSG00000037822ENSMUST00000040532ENSMUST00000121661ENSMUST00000125954ENSMUST00000135258ENSMUST00000139122ENSMUST00000149167
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005799 ENSDART00000008201 N/A N/A N/A 5.017±1.42 N/A N/A 13.468±0.83 24.184±3.39 2.089±0.00 N/A 5.583±0.00 N/A N/A N/A
ENSDART00000131979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000013505 ENSDART00000025770 N/A N/A N/A 10.418±0.15 N/A N/A 4.188±1.94 4.783±4.32 0.791±0.00 N/A N/A N/A N/A N/A
ENSDART00000139003 N/A N/A N/A 35.319±14.92 N/A N/A 6.003±4.86 4.016±3.20 0.544±0.00 N/A 5.623±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078140 ENST00000261427 7.604±0.00 9.455±0.00 3.105±0.00 14.349±3.13 8.032±1.97 5.935±1.95 4.026±1.54 10.341±2.52 6.539±0.44 0.646±0.00 7.300±0.00 6.909±2.13 7.265±2.30 6.343±0.00
ENST00000438068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.468±0.00 N/A
ENST00000510719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510934 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.027±0.00 N/A N/A N/A 22.991±5.28
ENST00000513231 16.096±0.00 N/A N/A N/A N/A 15.160±0.00 14.531±0.00 N/A 13.861±0.00 18.032±0.00 N/A 14.806±0.00 24.890±0.00 22.122±1.25
ENSG00000163683 ENST00000295958 N/A 6.042±0.00 1.372±0.00 7.240±4.18 8.400±3.10 7.991±2.65 0.366±0.06 10.263±2.92 5.427±0.00 1.424±0.09 1.447±0.00 3.228±1.98 2.827±1.20 6.474±3.45
ENST00000505729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.992±0.00
ENST00000512441 N/A N/A 7.776±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.251±0.00 20.586±0.00 31.740±0.00
ENSG00000180610 ENST00000314232 0.423±0.00 0.150±0.00 0.224±0.00 0.118±0.00 0.332±0.14 1.008±0.00 0.069±0.00 0.161±0.00 0.549±0.00 0.238±0.13 N/A 0.406±0.22 0.149±0.08 0.203±0.16
ENSG00000243260 ENST00000497468 0.449±0.00 0.581±0.00 N/A 0.165±0.00 5.173±0.00 1.148±0.00 0.049±0.00 1.493±0.64 0.095±0.00 1.870±1.71 N/A 0.099±0.00 0.099±0.00 0.460±0.03
ENSG00000249019 ENST00000513977 N/A N/A N/A 0.268±0.00 N/A 0.049±0.00 N/A N/A 0.189±0.00 N/A 0.047±0.00 N/A N/A N/A
ENSG00000249348 ENST00000504032 N/A 3.023±0.00 5.313±0.00 4.452±0.95 9.979±0.00 5.666±0.00 3.089±1.37 5.452±0.00 8.713±0.00 7.927±0.00 0.683±0.16 3.948±1.63 1.462±0.55 4.598±2.53
ENSG00000252975 ENST00000517166 N/A 0.432±0.00 N/A 0.639±0.00 N/A N/A 0.592±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000255458 ENST00000526807 0.239±0.00 0.183±0.00 N/A 0.183±0.01 0.119±0.00 0.027±0.00 0.042±0.00 0.274±0.00 0.026±0.00 0.152±0.00 N/A 0.131±0.03 N/A 6.132±3.61
ENST00000529094 0.374±0.00 1.411±0.00 N/A 1.282±0.00 N/A 0.786±0.00 0.165±0.00 0.234±0.00 0.694±0.00 N/A 0.167±0.00 0.219±0.12 0.139±0.00 6.826±2.18
ENST00000529314 N/A 0.173±0.00 0.701±0.00 0.197±0.00 0.164±0.00 0.106±0.00 0.018±0.00 0.158±0.00 0.034±0.00 0.318±0.00 N/A 0.085±0.01 0.103±0.00 N/A
ENST00000532680 N/A N/A 0.129±0.00 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A 0.103±0.03 N/A N/A
ENST00000533736 0.210±0.00 0.497±0.00 0.070±0.00 N/A N/A N/A 0.071±0.00 0.268±0.00 0.049±0.00 0.136±0.00 0.144±0.00 0.060±0.02 0.052±0.00 0.620±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029203 ENSMUST00000031105 9.887±0.59 3.629±0.00 19.803±0.00 47.073±0.00 9.775±3.46 N/A 6.952±1.93 10.721±1.49 9.190±2.33 N/A 11.035±1.55 29.719±16.81 60.756±32.72 260.527±0.00
ENSMUST00000122141 N/A 3.612±0.70 5.278±0.00 N/A N/A N/A N/A 4.610±2.00 4.286±1.86 N/A N/A N/A N/A N/A
ENSMUST00000131873 5.872±0.58 4.578±0.17 4.860±0.00 5.606±0.00 4.974±1.04 N/A 6.411±0.89 7.980±1.04 7.240±4.30 N/A 9.731±0.66 8.774±1.66 14.197±3.22 24.844±0.00
ENSMUST00000142407 8.882±2.04 6.829±1.46 6.393±0.77 16.807±8.13 6.972±4.02 9.670±0.72 3.107±0.40 6.792±1.25 4.828±1.24 11.949±0.24 2.609±0.26 11.908±4.81 3.346±1.77 N/A
ENSMUST00000146799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037822 ENSMUST00000040532 23.579±4.24 14.984±1.21 69.789±16.21 12.311±0.00 21.814±3.44 43.280±24.34 23.130±1.51 23.845±8.81 15.627±8.68 29.507±1.89 N/A 27.468±13.86 18.238±7.82 50.998±3.38
ENSMUST00000121661 11.756±0.00 22.642±7.07 N/A N/A 23.137±7.32 17.480±0.00 N/A N/A N/A N/A N/A 18.029±2.26 N/A N/A
ENSMUST00000125954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.536±0.00
ENSMUST00000135258 9.857±1.70 17.135±3.92 41.439±8.58 10.866±0.11 12.040±2.57 31.179±11.26 9.313±0.82 9.900±0.59 8.458±4.25 12.949±0.40 4.738±1.34 24.136±10.21 13.306±5.61 21.723±9.63
ENSMUST00000139122 10.977±1.08 13.114±1.19 29.623±1.12 13.125±5.04 12.285±1.49 12.906±2.49 10.412±0.84 9.399±1.51 5.551±2.36 21.348±2.53 5.403±0.98 14.252±3.71 3.147±2.26 0.304±0.00
ENSMUST00000144562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 122.364±13.98

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