C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD2 mitotic arrest deficient-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296509 MAD2L1-001 ENSG00000164109 9606 - 4:120055608-120067074 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296509 0.124±0.00 0.297±0.00 0.083±0.00 0.580±0.17 0.208±0.00 0.758±0.59 0.105±0.00 0.054±0.02 0.209±0.19 0.069±0.00 0.053±0.00 1.585±1.24 0.544±0.40 1.116±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YP CIL_0006YP_0002 CGP 4:119494395-120067074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000070 IEA mitotic sister chromatid segregation
GO:0000278 TAS mitotic cell cycle
GO:0000775 IEA chromosome, centromeric region
GO:0000776 IDA kinetochore
GO:0000922 IEA spindle pole
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005643 IDA nuclear pore
GO:0005829 IDA cytosol
GO:0007093 IGI mitotic cell cycle checkpoint
GO:0007094 TAS mitotic spindle assembly checkpoint
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0042177 IDA negative regulation of protein catabolic process
GO:0042802 IPI identical protein binding
GO:0042803 IPI protein homodimerization activity
GO:0043066 IMP negative regulation of apoptotic process
GO:0045930 IMP negative regulation of mitotic cell cycle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0060564 IDA negative regulation of mitotic anaphase-promoting complex activity
GO:0072686 IDA mitotic spindle
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101343 Mad2l1-002 protein_coding Mus_musculus 0 778
ENSMUST00000116605 Mad2l1-001 protein_coding Mus_musculus 0 743
ENSMUST00000125430 Mad2l1-003 retained_intron Mus_musculus 0 658
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00000005 66
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000008 58

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