C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD2 mitotic arrest deficient-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101343 Mad2l1-002 ENSMUSG00000029910 10090 + 6:66535468-66540991 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000101343
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101343 1.835±1.16 0.691±0.25 3.775±1.42 0.477±0.17 1.397±0.40 0.313±0.11 9.246±6.91 0.475±0.00 0.214±0.06 3.713±1.20 5.774±3.38 0.173±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000070 IMP mitotic sister chromatid segregation
GO:0000775 IDA chromosome, centromeric region
GO:0000776 IDA kinetochore
GO:0000922 IDA spindle pole
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005643 IEA nuclear pore
GO:0005829 ISS cytosol
GO:0007093 IEA mitotic cell cycle checkpoint
GO:0007094 ISA mitotic spindle assembly checkpoint
GO:0042177 ISS negative regulation of protein catabolic process
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0043066 IMP negative regulation of apoptotic process
GO:0045841 TAS negative regulation of mitotic metaphase/anaphase transition
GO:0045930 IEA negative regulation of mitotic cell cycle
GO:0048471 ISS perinuclear region of cytoplasm
GO:0060564 IEA negative regulation of mitotic anaphase-promoting complex activity
GO:0072686 ISS mitotic spindle
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296509 MAD2L1-001 protein_coding Homo_sapiens 0 778
ENST00000333047 MAD2L1-004 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000504707 MAD2L1-003 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000512484 MAD2L1-005 retained_intron Homo_sapiens 0 374
ENST00000556153 RP11-307P22.1-001 processed_pseudogene Homo_sapiens 0 721

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