C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110017D15 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030152 1110017D15Rik-001 ENSMUSG00000028441 10090 - 4:41505009-41517333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverPlacentaTestisENSMUST00000030152
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Placenta Testis
ENSMUST00000030152 0.055±0.00 0.087±0.00 0.067±0.00 0.553±0.19 0.065±0.01 0.159±0.04 0.098±0.03 0.036±0.02 0.196±0.12 263.589±111.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IW CIL_0005IW_0002 CGP 4:41495604-41517333
CIL_0005IP CIL_0005IP_0002 CGP 4:41505009-41569538

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002177 IDA manchette
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0043014 IDA alpha-tubulin binding
GO:0043623 IDA cellular protein complex assembly
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297623 C9orf24-001 protein_coding Homo_sapiens 0 946
ENST00000379124 C9orf24-007 protein_coding Homo_sapiens 0 466
ENST00000379126 C9orf24-002 protein_coding Homo_sapiens 0 222
ENST00000379127 C9orf24-004 protein_coding Homo_sapiens 0 466
ENST00000379133 C9orf24-003 protein_coding Homo_sapiens 0 466
ENST00000481295 C9orf24-008 processed_transcript Homo_sapiens 0 222

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