C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid stimulating hormone receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298171 TSHR-201 ENSG00000165409 9606 + 14:80955525-81146302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298171
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298171 0.076±0.00 0.310±0.00 0.111±0.05 0.037±0.00 0.552±0.00 0.100±0.08 0.040±0.00 0.367±0.28 0.606±0.00 0.010±0.00 0.084±0.03 0.012±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TZ CIL_0004TZ_0001 CGP 14:80197527-80959517
CIL_00064H CIL_00064H_0002 CGP 14:80476983-81146302
CIL_0004TT CIL_0004TT_0001 CGP 14:80954989-81221377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0038194 IEA thyroid-stimulating hormone signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021346 Tshr-001 protein_coding Mus_musculus 0 2527
ENSMUST00000021343 Tshr-002 protein_coding Mus_musculus 0 780
ENSMUST00000186437 Tshr-003 protein_coding Mus_musculus 0 420
ENSDART00000054086 tshr-201 protein_coding Danio_rerio 0 248

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