C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004TZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000211448-ENSG00000100629 CGP 9606 14:80197527-80959517
GeneTranscriptPositionBiotype
ENSG00000100629 (CEP128)
centrosomal protein 128kDa 		ENST00000216517 (CEP128-004) 80830165-80941687 protein_coding
ENST00000281129 (CEP128-201) 80496474-80939540 protein_coding
ENST00000553717 (CEP128-013) 80497497-80531000 processed_transcript
ENST00000554298 (CEP128-003) 80905471-80941701 retained_intron
ENST00000554368 (CEP128-007) 80945556-80959517 processed_transcript
ENST00000554502 (CEP128-006) 80476983-80836336 nonsense_mediated_decay
ENST00000554728 (CEP128-012) 80742755-80761592 protein_coding
ENST00000554827 (CEP128-005) 80830165-80904928 protein_coding
ENST00000555265 (CEP128-001) 80496478-80941785 protein_coding
ENST00000555529 (CEP128-002) 80899973-80959484 protein_coding
ENST00000556042 (CEP128-010) 80904910-80959501 protein_coding
ENST00000556061 (CEP128-015) 80490479-80580425 protein_coding
ENST00000556800 (CEP128-008) 80957798-80959506 retained_intron
ENST00000556981 (CEP128-009) 80916452-80959504 protein_coding
ENST00000557377 (CEP128-014) 80526684-80530960 retained_intron
ENST00000557411 (CEP128-011) 80914316-80941719 protein_coding
ENSG00000165409 (TSHR)
thyroid stimulating hormone receptor 		ENST00000298171 (TSHR-201) 80955525-81146302 protein_coding
ENST00000342443 (TSHR-003) 80955431-81108950 protein_coding
ENST00000541158 (TSHR-001) 80955043-81146302 protein_coding
ENST00000553763 (TSHR-007) 80955581-81068473 retained_intron
ENST00000554263 (TSHR-004) 80955655-81108918 protein_coding
ENST00000554435 (TSHR-005) 80955655-81108919 protein_coding
ENST00000555326 (TSHR-008) 80955629-81091132 nonsense_mediated_decay
ENST00000556031 (TSHR-009) 81108349-81108840 retained_intron
ENST00000557096 (TSHR-006) 80954989-80955937 processed_transcript
ENSG00000211448 (DIO2)
deiodinase, iodothyronine, type II 		ENST00000422005 (DIO2-201) 80197527-80211521 protein_coding
ENST00000438257 (DIO2-002) 80197530-80211627 protein_coding
ENST00000553594 (DIO2-007) 80211455-80315876 protein_coding
ENST00000553968 (DIO2-009) 80211454-80212178 protein_coding
ENST00000554188 (DIO2-006) 80211309-80387757 protein_coding
ENST00000555750 (DIO2-003) 80202598-80211500 protein_coding
ENST00000555844 (DIO2-005) 80202819-80211314 nonsense_mediated_decay
ENST00000556384 (DIO2-008) 80278429-80315838 processed_transcript
ENST00000556811 (DIO2-004) 80202503-80211314 protein_coding
ENST00000557010 (DIO2-001) 80197530-80231054 protein_coding
ENST00000557125 (DIO2-010) 80202618-80211472 protein_coding
ENSG00000258452 (RP11-757H14.2)
 ENST00000555320 (RP11-757H14.2-001) 80822524-80822796 processed_pseudogene
ENSG00000258766 (DIO2-AS1)
DIO2 antisense RNA 1 		ENST00000553979 (DIO2-AS1-001) 80211419-80455469 antisense
CIL_0004TZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007682-ENSMUSG00000061533 CGP 10090 12:90724554-91384409
GeneTranscriptPositionBiotype
ENSMUSG00000007682 (Dio2)
deiodinase, iodothyronine, type II 		ENSMUST00000082432 (Dio2-201) 90724554-90738438 protein_coding
ENSMUSG00000061533 (Cep128)
centrosomal protein 128 		ENSMUST00000123161 (Cep128-013) 90999565-91183719 processed_transcript
ENSMUST00000123400 (Cep128-007) 90999342-91030078 processed_transcript
ENSMUST00000126048 (Cep128-012) 90999340-91063411 processed_transcript
ENSMUST00000127802 (Cep128-002) 91289393-91384409 retained_intron
ENSMUST00000127866 (Cep128-005) 91338239-91384359 retained_intron
ENSMUST00000129111 (Cep128-004) 91340061-91384409 processed_transcript
ENSMUST00000133329 (Cep128-011) 91022400-91183772 processed_transcript
ENSMUST00000138935 (Cep128-003) 91362880-91384353 retained_intron
ENSMUST00000140674 (Cep128-010) 91213697-91260048 protein_coding
ENSMUST00000141429 (Cep128-001) 90998492-91384409 protein_coding
ENSMUST00000143415 (Cep128-006) 90998492-91266933 nonsense_mediated_decay
ENSMUST00000145094 (Cep128-009) 91319594-91333324 processed_transcript
ENSMUST00000154836 (Cep128-008) 90999342-91030078 processed_transcript
ENSMUSG00000064548 (n-R5s65)
nuclear encoded rRNA 5S 65 		ENSMUST00000082614 (n-R5s65-201) 90801619-90801735 rRNA
ENSMUSG00000084566 (Gm26477)
predicted gene, 26477 		ENSMUST00000122617 (Gm26477-201) 90981225-90981547 misc_RNA
ENSMUSG00000085004 (5430427M07Rik)
RIKEN cDNA 5430427M07 gene 		ENSMUST00000129932 (5430427M07Rik-001) 91050369-91079907 antisense
ENSMUSG00000097071 (4930544I03Rik)
RIKEN cDNA 4930544I03 gene 		ENSMUST00000181184 (4930544I03Rik-201) 90753208-90969768 lincRNA
ENSMUSG00000097157 (Gm26512)
predicted gene, 26512 		ENSMUST00000181874 (Gm26512-201) 90738201-90750693 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TZ_0001ENSG00000100629ENST00000216517ENST00000281129ENST00000554502ENST00000554728ENST00000555265ENST00000556061ENST00000557411ENSG00000165409ENST00000298171ENST00000342443ENST00000541158ENST00000553763ENST00000554263ENST00000554435ENST00000556031ENST00000557096ENSG00000211448ENST00000422005ENST00000438257ENST00000553968ENST00000555844ENST00000556811ENST00000557010ENST00000557125ENSG00000258452ENST00000555320ENSG00000258766ENST00000553979CIL_0004TZ_0002ENSMUSG00000007682ENSMUST00000082432ENSMUSG00000061533ENSMUST00000123161ENSMUST00000126048ENSMUST00000127802ENSMUST00000127866ENSMUST00000129111ENSMUST00000140674ENSMUST00000141429ENSMUST00000143415ENSMUST00000154836ENSMUSG00000064548ENSMUST00000082614ENSMUSG00000084566ENSMUST00000122617ENSMUSG00000085004ENSMUST00000129932ENSMUSG00000097071ENSMUST00000181184ENSMUSG00000097157ENSMUST00000181874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100629 ENST00000216517 0.283±0.00 N/A N/A N/A N/A N/A N/A 0.165±0.00 0.577±0.00 N/A N/A 0.346±0.00 0.159±0.00 2.094±0.00
ENST00000281129 0.188±0.00 0.183±0.00 0.144±0.00 0.176±0.05 0.438±0.00 0.557±0.00 N/A 0.140±0.00 0.054±0.00 N/A 0.180±0.00 0.289±0.18 0.204±0.01 0.492±0.00
ENST00000553717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554502 0.156±0.00 0.605±0.00 N/A 0.190±0.00 0.254±0.00 0.169±0.00 0.099±0.04 N/A N/A N/A 0.244±0.00 0.197±0.03 0.140±0.06 0.535±0.06
ENST00000554728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A
ENST00000554827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555265 N/A N/A 0.219±0.00 N/A N/A N/A 0.191±0.00 N/A N/A 0.448±0.15 N/A 0.317±0.07 0.122±0.00 0.920±0.00
ENST00000555529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556061 N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.429±0.00 1.206±0.00 N/A N/A
ENST00000556800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557411 N/A N/A N/A N/A N/A N/A N/A 1.011±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000165409 ENST00000298171 0.076±0.00 N/A 0.310±0.00 0.111±0.05 0.037±0.00 0.552±0.00 0.100±0.08 0.040±0.00 0.367±0.28 0.606±0.00 0.010±0.00 0.084±0.03 0.012±0.00 0.026±0.00
ENST00000342443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A
ENST00000541158 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.00
ENST00000554263 N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A 0.051±0.00 0.028±0.00 N/A
ENST00000554435 N/A N/A N/A 0.310±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556031 N/A N/A N/A 1.303±0.00 N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A 0.318±0.00
ENST00000557096 N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211448 ENST00000422005 N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438257 N/A 0.428±0.00 N/A 5.257±3.69 4.906±0.00 0.300±0.00 0.939±0.26 0.180±0.17 0.271±0.00 0.216±0.07 0.264±0.00 2.342±2.19 2.535±1.44 1.069±0.00
ENST00000553594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.898±0.00 N/A
ENST00000554188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.997±0.00 N/A N/A N/A
ENST00000556384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556811 N/A N/A 0.316±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A
ENST00000557010 N/A N/A N/A N/A 0.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557125 N/A N/A N/A N/A N/A N/A N/A 0.877±0.00 N/A 1.012±0.00 N/A N/A N/A N/A
ENSG00000258452 ENST00000555320 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.062±0.00 N/A N/A N/A
ENSG00000258766 ENST00000553979 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007682 ENSMUST00000082432 28.283±27.63 0.904±0.27 0.550±0.17 1.467±1.97 0.483±0.13 0.044±0.03 0.450±0.04 0.334±0.08 0.051±0.01 0.482±0.34 0.151±0.04 3.267±1.35 0.095±0.11 0.952±0.08
ENSMUSG00000061533 ENSMUST00000123161 N/A 1.567±0.00 N/A N/A N/A N/A N/A N/A 0.441±0.13 N/A 0.223±0.00 1.582±0.00 N/A N/A
ENSMUST00000123400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A N/A N/A
ENSMUST00000127802 N/A 0.377±0.00 N/A 0.901±0.00 0.750±0.00 0.376±0.13 N/A 0.381±0.05 0.140±0.00 0.734±0.00 0.073±0.00 2.324±1.44 3.323±0.00 N/A
ENSMUST00000127866 N/A N/A N/A N/A N/A 0.258±0.00 N/A 0.226±0.04 0.081±0.00 N/A 0.146±0.00 N/A N/A N/A
ENSMUST00000129111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A
ENSMUST00000133329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140674 N/A N/A N/A N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A N/A N/A N/A
ENSMUST00000141429 0.493±0.31 0.228±0.06 0.744±0.03 1.292±0.15 0.348±0.11 0.271±0.12 0.282±0.01 0.316±0.07 2.881±3.10 0.759±0.16 0.140±0.05 1.628±1.06 1.892±1.10 42.450±7.29
ENSMUST00000143415 N/A 0.100±0.02 N/A N/A 0.283±0.04 N/A N/A N/A 0.088±0.00 N/A 0.073±0.01 0.809±0.17 N/A N/A
ENSMUST00000145094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154836 N/A N/A N/A N/A N/A N/A N/A N/A 0.530±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000064548 ENSMUST00000082614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.889±0.00
ENSMUSG00000084566 ENSMUST00000122617 N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A 0.321±0.10
ENSMUSG00000085004 ENSMUST00000129932 N/A N/A N/A N/A N/A 9.589±4.55 N/A N/A N/A 1.293±0.00 N/A N/A N/A N/A
ENSMUSG00000097071 ENSMUST00000181184 0.264±0.11 0.590±0.41 0.115±0.03 0.282±0.26 0.467±0.20 0.259±0.19 0.053±0.02 0.128±0.09 0.050±0.05 0.314±0.13 N/A 0.635±0.28 0.232±0.25 4.335±0.75
ENSMUSG00000097157 ENSMUST00000181874 N/A N/A 0.193±0.03 N/A N/A N/A N/A N/A 0.017±0.01 N/A N/A N/A N/A 1.625±0.11

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