C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA pseudouridylate synthase domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298317 RPUSD4-001 ENSG00000165526 9606 - 11:126202094-126211692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleOvaryENST00000298317
Transcript ID Brain Colon Heart Liver Muscle Ovary
ENST00000298317 12.554±0.00 9.530±0.00 15.062±0.00 2.751±0.00 5.596±0.00 16.540±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034543 Rpusd4-001 protein_coding Mus_musculus 0 1068

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