C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 175, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298492 FAM175B-001 ENSG00000165660 9606 + 10:124801785-124836670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298492
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298492 3.685±0.00 5.596±0.00 6.170±0.00 4.182±0.65 4.112±0.67 4.093±0.69 2.606±1.03 3.900±0.65 4.284±1.19 3.970±1.68 5.681±2.02 6.001±1.08 4.637±1.26 4.267±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084V CIL_00084V_0001 VISTA 10:124437964-125038882
CIL_0001V2 CIL_0001V2_0001 CGP 10:124801785-124988189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0031593 IDA polyubiquitin binding
GO:0070552 IDA BRISC complex
GO:0071497 IEA cellular response to freezing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084497 Fam175b-001 protein_coding Mus_musculus 0 2266
ENSMUST00000129552 Fam175b-003 nonsense_mediated_decay Mus_musculus 0 1541
ENSMUST00000138436 Fam175b-005 retained_intron Mus_musculus 0 1297
ENSMUST00000106161 Fam175b-002 protein_coding Mus_musculus 0 1138
ENSMUST00000147786 Fam175b-006 nonsense_mediated_decay Mus_musculus 0 845
ENSMUST00000144225 Fam175b-004 retained_intron Mus_musculus 0 643
ENSMUST00000134784 Fam175b-007 processed_transcript Mus_musculus 0 531

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