C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 175, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084497 Fam175b-001 ENSMUSG00000030965 10090 + 7:132859225-132885111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084497 6.297±1.82 4.643±2.12 9.994±0.55 11.901±3.13 6.062±1.53 5.157±0.92 5.144±0.12 9.457±0.76 6.294±0.69 7.415±0.55 6.824±0.59 6.477±2.76 12.752±2.63 10.895±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00084V CIL_00084V_0002 VISTA 7:132507589-133108550
CIL_0001V2 CIL_0001V2_0002 CGP 7:132859225-132986391

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0031593 ISS polyubiquitin binding
GO:0070552 ISS BRISC complex
GO:0071497 IGI cellular response to freezing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298492 FAM175B-001 protein_coding Homo_sapiens 0 2266

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