C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001V2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165660-ENSG00000019995 CGP 9606 10:124801785-124988189
GeneTranscriptPositionBiotype
ENSG00000019995 (ZRANB1)
zinc finger, RAN-binding domain containing 1 		ENST00000359653 (ZRANB1-001) 124942123-124988189 protein_coding
ENST00000471421 (ZRANB1-002) 124981411-124983496 processed_transcript
ENSG00000165660 (FAM175B)
family with sequence similarity 175, member B 		ENST00000298492 (FAM175B-001) 124801785-124836670 protein_coding
ENSG00000175029 (CTBP2)
C-terminal binding protein 2 		ENST00000309035 (CTBP2-006) 124988938-125027890 protein_coding
ENST00000334808 (CTBP2-005) 124989135-125006013 protein_coding
ENST00000337195 (CTBP2-001) 124984317-125160513 protein_coding
ENST00000395705 (CTBP2-015) 124993267-125003000 nonsense_mediated_decay
ENST00000411419 (CTBP2-011) 124989225-125161026 protein_coding
ENST00000460976 (CTBP2-004) 125003338-125160145 processed_transcript
ENST00000467395 (CTBP2-008) 125110997-125159957 processed_transcript
ENST00000476817 (CTBP2-010) 125038997-125161170 processed_transcript
ENST00000486955 (CTBP2-012) 124997792-125003384 retained_intron
ENST00000493552 (CTBP2-009) 125003464-125028028 processed_transcript
ENST00000494626 (CTBP2-002) 124989225-125160499 protein_coding
ENST00000530884 (CTBP2-014) 125039046-125161061 protein_coding
ENST00000530930 (CTBP2-013) 125100587-125138250 processed_transcript
ENST00000531469 (CTBP2-003) 124989225-125158716 protein_coding
ENSG00000207494 (Y_RNA)
Y RNA 		ENST00000384763 (Y_RNA.1-775) 124814958-124815062 misc_RNA
ENSG00000214807 (NPM1P31)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 31 		ENST00000399021 (NPM1P31-001) 124867510-124868326 processed_pseudogene
ENSG00000226899 (RP11-298J20.3)
 ENST00000449984 (RP11-298J20.3-001) 124945204-124946432 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0001V2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030965-ENSMUSG00000030967 CGP 10090 7:132859225-132986391
GeneTranscriptPositionBiotype
ENSMUSG00000030965 (Fam175b)
family with sequence similarity 175, member B 		ENSMUST00000084497 (Fam175b-001) 132859225-132885111 protein_coding
ENSMUST00000106161 (Fam175b-002) 132859244-132881309 protein_coding
ENSMUST00000129552 (Fam175b-003) 132859249-132885108 nonsense_mediated_decay
ENSMUST00000134784 (Fam175b-007) 132859307-132878614 processed_transcript
ENSMUST00000138436 (Fam175b-005) 132879375-132885110 retained_intron
ENSMUST00000144225 (Fam175b-004) 132859249-132875731 retained_intron
ENSMUST00000147786 (Fam175b-006) 132859237-132880881 nonsense_mediated_decay
ENSMUSG00000030967 (Zranb1)
zinc finger, RAN-binding domain containing 1 		ENSMUST00000033265 (Zranb1-201) 132949584-132983996 protein_coding
ENSMUST00000106157 (Zranb1-001) 132931142-132986391 protein_coding
ENSMUST00000153335 (Zranb1-002) 132980859-132982766 retained_intron
ENSMUSG00000085663 (Gm15718)
predicted gene 15718 		ENSMUST00000131085 (Gm15718-001) 132979582-132983552 antisense

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V2_0001ENSG00000019995ENST00000359653ENST00000471421ENSG00000165660ENST00000298492ENSG00000175029ENST00000309035ENST00000334808ENST00000337195ENST00000395705ENST00000411419ENST00000460976ENST00000467395ENST00000476817ENST00000486955ENST00000493552ENST00000494626ENST00000530884ENST00000530930ENST00000531469ENSG00000207494ENST00000384763ENSG00000214807ENST00000399021ENSG00000226899ENST00000449984CIL_0001V2_0002ENSMUSG00000030965ENSMUST00000084497ENSMUST00000106161ENSMUST00000129552ENSMUST00000134784ENSMUST00000138436ENSMUST00000144225ENSMUST00000147786ENSMUSG00000030967ENSMUST00000033265ENSMUST00000106157ENSMUST00000153335ENSMUSG00000085663ENSMUST00000131085
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V2_0001ENSG00000019995ENST00000359653ENSG00000165660ENST00000298492ENSG00000175029ENST00000309035ENST00000334808ENST00000337195ENST00000494626ENST00000531469ENSG00000207494ENST00000384763ENSG00000214807ENST00000399021ENSG00000226899ENST00000449984CIL_0001V2_0002ENSMUSG00000030965ENSMUST00000084497ENSMUST00000106161ENSMUST00000129552ENSMUST00000138436ENSMUST00000147786ENSMUSG00000030967ENSMUST00000033265ENSMUST00000106157ENSMUSG00000085663ENSMUST00000131085
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000019995 ENST00000359653 N/A 1.994±0.00 1.444±0.00 1.516±0.00 N/A 2.181±0.00 1.306±0.00 2.739±0.00 N/A N/A N/A 4.308±0.71 N/A N/A
ENST00000471421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165660 ENST00000298492 3.685±0.00 5.596±0.00 6.170±0.00 4.182±0.65 4.112±0.67 4.093±0.69 2.606±1.03 3.900±0.65 4.284±1.19 3.970±1.68 5.681±2.02 6.001±1.08 4.637±1.26 4.267±0.58
ENSG00000175029 ENST00000309035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.131±0.00 N/A N/A
ENST00000334808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.191±0.00 N/A
ENST00000337195 N/A 4.265±0.00 N/A 6.043±0.00 4.941±0.00 6.257±4.06 0.615±0.00 6.579±0.00 0.942±0.10 N/A 11.533±0.00 6.073±3.81 5.547±1.37 N/A
ENST00000395705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.277±0.00 N/A N/A
ENST00000530884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531469 N/A N/A 4.063±0.00 N/A 7.057±0.00 5.903±0.00 N/A N/A N/A N/A N/A 25.810±13.40 8.541±2.17 N/A
ENSG00000207494 ENST00000384763 N/A N/A N/A 0.999±0.00 N/A N/A 0.316±0.00 N/A N/A N/A N/A N/A N/A 0.459±0.00
ENSG00000214807 ENST00000399021 0.014±0.00 0.031±0.00 N/A 0.030±0.00 N/A N/A N/A 0.015±0.00 N/A N/A 0.014±0.00 N/A N/A 0.033±0.01
ENSG00000226899 ENST00000449984 0.053±0.00 0.133±0.00 0.149±0.00 0.144±0.00 0.194±0.08 0.075±0.00 0.122±0.03 0.065±0.00 0.181±0.00 0.216±0.17 0.036±0.00 0.216±0.28 0.029±0.00 0.117±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030965 ENSMUST00000084497 6.297±1.82 4.643±2.12 9.994±0.55 11.901±3.13 6.062±1.53 5.157±0.92 5.144±0.12 9.457±0.76 6.294±0.69 7.415±0.55 6.824±0.59 6.477±2.76 12.752±2.63 10.895±0.76
ENSMUST00000106161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.713±0.00 N/A
ENSMUST00000129552 1.036±0.00 3.232±1.30 N/A 3.706±0.00 1.169±0.00 1.164±0.00 N/A 1.316±0.19 1.046±0.00 N/A 0.817±0.00 3.192±1.89 4.839±2.76 3.341±0.00
ENSMUST00000134784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.141±0.00 N/A N/A
ENSMUST00000144225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147786 N/A N/A N/A 13.026±0.00 N/A N/A N/A N/A N/A N/A N/A 26.847±0.00 27.037±6.36 21.544±0.00
ENSMUSG00000030967 ENSMUST00000033265 3.745±0.59 N/A N/A 10.298±0.00 3.885±2.27 N/A N/A N/A 4.352±1.15 N/A 5.458±1.02 5.730±2.34 5.857±1.39 24.036±12.27
ENSMUST00000106157 6.426±2.29 7.759±1.04 13.426±0.46 12.991±5.67 4.724±1.05 4.356±1.03 5.346±0.94 5.404±1.04 5.404±2.09 7.027±0.91 14.028±1.15 6.946±2.05 5.801±1.53 5.940±2.99
ENSMUST00000153335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085663 ENSMUST00000131085 N/A N/A 0.086±0.03 0.208±0.00 N/A 0.854±0.00 N/A N/A 0.067±0.01 N/A 0.227±0.03 0.494±0.25 0.194±0.16 N/A

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