C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300181 TSC22D4-001 ENSG00000166925 9606 - 7:100466519-100479279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300181
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300181 13.655±0.00 14.598±0.00 1.298±0.00 6.608±5.67 15.046±0.00 7.820±7.50 7.721±7.63 3.402±0.00 21.492±0.00 6.238±0.00 19.543±11.34 26.589±6.82 12.328±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006970 IEA response to osmotic stress
GO:0045892 NAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100539 Tsc22d4-002 protein_coding Mus_musculus 0 1506
ENSMUST00000100540 Tsc22d4-001 protein_coding Mus_musculus 0 1264
ENSMUST00000129349 Tsc22d4-003 retained_intron Mus_musculus 0 1133
ENSMUST00000110985 Tsc22d4-006 protein_coding Mus_musculus 0 403
ENSMUST00000141733 Tsc22d4-005 protein_coding Mus_musculus 0 401
ENSMUST00000129399 Tsc22d4-009 retained_intron Mus_musculus 0 219
ENSDART00000050457 protein_coding Danio_rerio 3e-31 141

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