C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300482 TRPM2-004 ENSG00000142185 9606 + 21:44350163-44443081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryENST00000300482
Transcript ID Brain Breast Ovary
ENST00000300482 2.283±0.00 0.764±0.00 0.184±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005261 IEA cation channel activity
GO:0005262 IEA calcium channel activity
GO:0005272 IEA sodium channel activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0006816 TAS calcium ion transport
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0034220 TAS ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0047631 IEA ADP-ribose diphosphatase activity
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105401 Trpm2-001 protein_coding Mus_musculus 0 4156
ENSMUST00000105400 Trpm2-002 processed_transcript Mus_musculus 0 4143
ENSMUST00000126206 Trpm2-007 retained_intron Mus_musculus 0 2178
ENSMUST00000140471 Trpm2-005 retained_intron Mus_musculus 0 1581
ENSMUST00000153842 Trpm2-004 retained_intron Mus_musculus 0 1454

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