C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105401 Trpm2-001 ENSMUSG00000009292 10090 - 10:77907722-77969854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungOvaryTestisENSMUST00000105401
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Testis
ENSMUST00000105401 0.255±0.09 0.054±0.02 0.393±0.20 0.264±0.00 0.036±0.01 0.094±0.03 0.323±0.38 0.094±0.00 0.136±0.03 0.017±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005261 IEA cation channel activity
GO:0005262 IEA calcium channel activity
GO:0005272 IEA sodium channel activity
GO:0005384 IDA manganese ion transmembrane transporter activity
GO:0005886 IDA plasma membrane
GO:0006828 IDA manganese ion transport
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0033194 IDA response to hydroperoxide
GO:0035725 IEA sodium ion transmembrane transport
GO:0047631 IEA ADP-ribose diphosphatase activity
GO:0070588 IEA calcium ion transmembrane transport
GO:0071421 IDA manganese ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000155858 TRPM5-001 protein_coding Homo_sapiens 0.000000000000007 88
ENST00000300481 TRPM2-002 protein_coding Homo_sapiens 0 2078
ENST00000300482 TRPM2-004 protein_coding Homo_sapiens 0 4156
ENST00000397928 TRPM2-001 protein_coding Homo_sapiens 0 4156
ENST00000397932 TRPM2-007 protein_coding Homo_sapiens 0 3524
ENST00000498430 TRPM2-005 processed_transcript Homo_sapiens 0 3600
ENST00000528453 TRPM5-004 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000533060 TRPM5-003 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000533881 TRPM5-002 protein_coding Homo_sapiens 0.000000000000007 88

Loading