C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lipoxygenase homology domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300591 LOXHD1-002 ENSG00000167210 9606 - 18:46476972-46559312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000300591
Transcript ID Ovary Placenta Testis
ENST00000300591 0.028±0.00 0.018±0.00 0.970±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B1 CIL_0000B1_0002 CGP 18:46326809-46657033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005262 IBA calcium channel activity
GO:0005515 IEA protein binding
GO:0007605 IMP sensory perception of sound
GO:0016020 IBA membrane
GO:0032420 ISS stereocilium
GO:0050982 IBA detection of mechanical stimulus
GO:0070588 IBA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123410 Loxhd1-003 protein_coding Mus_musculus 0 4270
ENSMUST00000096547 Loxhd1-201 protein_coding Mus_musculus 0 4132
ENSMUST00000148341 Loxhd1-002 protein_coding Mus_musculus 0 2268
ENSMUST00000123166 Loxhd1-004 protein_coding Mus_musculus 0 1676
ENSMUST00000035501 Loxhd1-001 protein_coding Mus_musculus 0 459

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