C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromatin assembly factor 1, subunit A (p150)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301280 CHAF1A-001 ENSG00000167670 9606 + 19:4402662-4443392 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000301280
Transcript ID Adrenal Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000301280 9.611±0.00 0.505±0.00 4.770±0.00 3.195±2.23 0.670±0.00 0.743±0.00 8.260±0.00 2.670±1.69 5.834±1.13 12.065±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036Q CIL_00036Q_0001 CGP 19:4360370-4445018
CIL_0001RW CIL_0001RW_0001 CGP 19:4402662-4457822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0003682 TAS chromatin binding
GO:0005515 IPI protein binding
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006461 TAS protein complex assembly
GO:0007049 IEA cell cycle
GO:0031497 IDA chromatin assembly
GO:0033186 IDA CAF-1 complex
GO:0042802 IPI identical protein binding
GO:0043234 IDA protein complex
GO:0051082 TAS unfolded protein binding
GO:0070087 IPI chromo shadow domain binding

Homologs

No Homologs available.

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