C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet derived growth factor D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302251 PDGFD-002 ENSG00000170962 9606 - 11:103907189-104164379 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000302251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000302251 2.547±0.00 0.474±0.00 0.540±0.00 0.232±0.00 1.565±1.04 0.799±0.36 1.349±0.88 1.065±0.00 1.413±0.00 1.314±0.00 0.577±0.00 2.911±0.67 0.433±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002I3 CIL_0002I3_0001 CGP 11:103907186-104164379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005161 IEA platelet-derived growth factor receptor binding
GO:0005576 TAS extracellular region
GO:0005788 TAS endoplasmic reticulum lumen
GO:0007275 IEA multicellular organismal development
GO:0008083 IEA growth factor activity
GO:0016020 IEA membrane
GO:0048008 IEA platelet-derived growth factor receptor signaling pathway
GO:0051781 IEA positive regulation of cell division
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058692 Pdgfd-201 protein_coding Mus_musculus 0 1208
ENSMUST00000168039 Pdgfd-202 protein_coding Mus_musculus 0 1125

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