C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-derived growth factor, D polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058692 Pdgfd-201 ENSMUSG00000032006 10090 + 9:6168661-6378843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058692 2.061±1.02 4.427±1.66 9.246±0.88 0.111±0.07 0.946±0.30 0.466±0.13 0.808±0.31 0.928±0.45 0.129±0.06 2.696±0.14 0.344±0.20 2.382±1.60 0.384±0.17 0.362±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002I3 CIL_0002I3_0002 CGP 9:6168612-6378843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005161 ISO platelet-derived growth factor receptor binding
GO:0005615 ISO extracellular space
GO:0007275 IEA multicellular organismal development
GO:0008083 IEA growth factor activity
GO:0009987 ISO cellular process
GO:0016020 IEA membrane
GO:0048008 IEA platelet-derived growth factor receptor signaling pathway
GO:0050730 IDA regulation of peptidyl-tyrosine phosphorylation
GO:0051781 IEA positive regulation of cell division
GO:0071230 IDA cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302251 PDGFD-002 protein_coding Homo_sapiens 0 1208
ENST00000393158 PDGFD-001 protein_coding Homo_sapiens 0 1131

Loading