C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: farnesyltransferase, CAAX box, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302279 FNTA-001 ENSG00000168522 9606 + 8:43056153-43085788 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302279
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302279 22.688±0.00 12.335±0.00 17.902±6.43 33.622±0.00 32.757±0.00 11.859±8.19 10.315±0.00 10.564±0.00 20.947±0.00 16.401±12.56 19.415±2.49 20.409±8.86 23.604±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004660 IDA protein farnesyltransferase activity
GO:0004661 IDA protein geranylgeranyltransferase activity
GO:0004662 IEA CAAX-protein geranylgeranyltransferase activity
GO:0004663 IEA Rab geranylgeranyltransferase activity
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005875 IDA microtubule associated complex
GO:0005953 IDA CAAX-protein geranylgeranyltransferase complex
GO:0005965 IDA protein farnesyltransferase complex
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007603 TAS phototransduction, visible light
GO:0008017 IDA microtubule binding
GO:0008318 IEA protein prenyltransferase activity
GO:0010469 IEA regulation of receptor activity
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0018342 IEA protein prenylation
GO:0018343 IDA protein farnesylation
GO:0018344 IDA protein geranylgeranylation
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030548 IEA acetylcholine receptor regulator activity
GO:0030971 IEA receptor tyrosine kinase binding
GO:0043014 IDA alpha-tubulin binding
GO:0045213 IEA neurotransmitter receptor metabolic process
GO:0090044 IDA positive regulation of tubulin deacetylation
GO:0090045 IDA positive regulation of deacetylase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016138 Fnta-201 protein_coding Mus_musculus 0 1397

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