C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113904 Zcchc4-001 ENSMUSG00000029179 10090 + 5:52783055-52824665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113904 3.188±1.39 4.226±1.03 2.528±0.32 3.762±1.10 3.695±0.47 2.586±0.79 2.110±0.15 2.076±1.00 2.949±1.51 3.603±0.69 2.029±0.28 3.764±0.94 4.618±1.01 1.963±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OW CIL_0002OW_0002 CGP 5:52741587-52824665
CIL_0002F9 CIL_0002F9_0002 CGP 5:52775409-52867797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302874 ZCCHC4-001 protein_coding Homo_sapiens 0 1591
ENST00000505412 ZCCHC4-004 protein_coding Homo_sapiens 0 902
ENST00000505451 ZCCHC4-002 processed_transcript Homo_sapiens 0 874
ENST00000507760 ZCCHC4-003 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000612982 ZCCHC4-201 protein_coding Homo_sapiens 0 708

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