C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vasorin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304735 VASN-001 ENSG00000168140 9606 + 16:4371848-4383528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304735
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304735 17.578±0.00 2.254±0.00 7.344±6.12 5.986±3.74 4.378±3.92 1.296±0.80 11.848±10.06 4.907±2.89 19.373±17.30 2.569±0.02 25.228±12.96 56.036±5.28 15.414±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009Y CIL_00009Y_0001 CGP 16:4331549-4420494
CIL_00009L CIL_00009L_0001 CGP 16:4354542-4425705
CIL_000003 CIL_000003_0002 CGP 16:4371848-4456775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005739 IEA mitochondrion
GO:0005765 IDA lysosomal membrane
GO:0005886 IEA plasma membrane
GO:0009986 IDA cell surface
GO:0010719 IMP negative regulation of epithelial to mesenchymal transition
GO:0016021 IEA integral component of membrane
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0050431 IPI transforming growth factor beta binding
GO:0070062 IDA extracellular vesicular exosome
GO:0071456 IEA cellular response to hypoxia
GO:0071461 IEA cellular response to redox state

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038770 Vasn-001 protein_coding Mus_musculus 0 1609

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