C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306177 USP42-005 ENSG00000106346 9606 + 7:6104884-6161564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306177 1.468±0.00 1.952±0.00 0.124±0.00 0.920±0.76 0.373±0.18 1.011±0.00 0.617±0.54 1.136±0.77 0.666±0.13 1.519±0.59 0.222±0.00 2.672±1.10 1.181±0.18 5.911±0.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007283 IEA spermatogenesis
GO:0016579 ISS protein deubiquitination
GO:0030154 IEA cell differentiation
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053287 Usp42-001 protein_coding Mus_musculus 0 2025
ENSMUST00000155408 Usp42-002 retained_intron Mus_musculus 0 1825

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