C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306433 POLR3D-003 ENSG00000168495 9606 + 8:22245104-22251167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306433
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306433 5.091±0.00 3.595±0.00 1.296±0.00 1.896±0.33 2.316±0.83 4.871±2.62 2.416±0.84 5.464±0.00 2.099±0.01 6.291±3.90 13.760±0.00 4.834±3.00 7.799±2.42 11.550±7.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005654 TAS nucleoplasm
GO:0005666 IEA:IBA DNA-directed RNA polymerase III complex
GO:0005829 TAS cytosol
GO:0006383 IEA:TAS transcription from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 TAS termination of RNA polymerase III transcription
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0032728 IDA positive regulation of interferon-beta production
GO:0045087 TAS innate immune response
GO:0045089 IDA positive regulation of innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000793 Polr3d-201 protein_coding Mus_musculus 0 1371
ENSMUST00000180358 Polr3d-202 protein_coding Mus_musculus 0 1367

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