C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 8 family, member E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306708 LRRC8E-001 ENSG00000171017 9606 + 19:7888505-7902016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000306708
Transcript ID Breast
ENST00000306708 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FX CIL_0002FX_0001 CGP 19:7868719-7902021
CIL_0002FU CIL_0002FU_0001 CGP 19:7888505-7914478

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053035 Lrrc8e-201 protein_coding Mus_musculus 0 2303
ENSMUST00000095078 Lrrc8a-001 protein_coding Mus_musculus 5.60519e-45 187
ENSMUST00000113654 Lrrc8a-002 protein_coding Mus_musculus 5.60519e-45 187
ENSMUST00000139454 Gm28035-001 nonsense_mediated_decay Mus_musculus 5.60519e-45 187

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