C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095078 Lrrc8a-001 ENSMUSG00000007476 10090 + 2:30237722-30263790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000095078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000095078 27.149±5.96 22.281±3.82 15.722±0.54 9.695±4.72 22.177±2.54 20.992±2.30 19.122±4.80 22.374±2.34 10.364±4.35 31.185±5.36 3.090±0.67 20.100±9.55 7.742±2.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002329 IMP pre-B cell differentiation
GO:0005886 ISS plasma membrane
GO:0006820 ISS anion transport
GO:0006884 ISS cell volume homeostasis
GO:0006970 ISS response to osmotic stress
GO:0034702 ISS ion channel complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000148138 lrrc8a-001 protein_coding Danio_rerio 0 1487
ENST00000259324 LRRC8A-201 protein_coding Homo_sapiens 0 3648
ENST00000306708 LRRC8E-001 protein_coding Homo_sapiens 5.60519e-45 187
ENST00000372599 LRRC8A-002 protein_coding Homo_sapiens 0 3565
ENST00000372600 LRRC8A-001 protein_coding Homo_sapiens 0 3696
ENST00000492784 LRRC8A-003 processed_transcript Homo_sapiens 0 377
ENST00000618098 LRRC8E-201 protein_coding Homo_sapiens 5.60519e-45 187

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