C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of calcineurin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306764 RCAN2-003 ENSG00000172348 9606 - 6:46220738-46491972 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryPlacentaTestisENST00000306764
Transcript ID Adrenal Colon Ovary Placenta Testis
ENST00000306764 2.160±0.00 1.879±0.00 3.446±0.00 0.632±0.00 2.518±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YF CIL_0008YF_0001 VISTA 6:45752763-46354264
CIL_000084 CIL_000084_0002 CGP 6:46220736-46652830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0019722 IEA calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044895 Rcan2-202 protein_coding Mus_musculus 0 1140
ENSMUST00000044792 Rcan2-201 protein_coding Mus_musculus 0 891
ENSMUST00000177857 Rcan2-203 protein_coding Mus_musculus 0 795

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