C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008YF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2397 VISTA 9606 6:45752763-46354264
GeneTranscriptPositionBiotype
ENSG00000001561 (ENPP4)
ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) 		ENST00000321037 (ENPP4-001) 46129993-46146699 protein_coding
ENSG00000112782 (CLIC5)
chloride intracellular channel 5 		ENST00000185206 (CLIC5-002) 45898451-46080395 protein_coding
ENST00000339561 (CLIC5-003) 45901761-46015849 protein_coding
ENST00000464137 (CLIC5-007) 46014283-46015546 processed_transcript
ENST00000476852 (CLIC5-006) 45932694-45937464 processed_transcript
ENST00000484572 (CLIC5-004) 45903066-45920714 processed_transcript
ENST00000486570 (CLIC5-005) 45914245-45937597 processed_transcript
ENST00000487396 (CLIC5-001) 45900308-45903179 processed_transcript
ENST00000544153 (CLIC5-201) 45911624-46015889 protein_coding
ENSG00000112796 (ENPP5)
ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 		ENST00000230565 (ENPP5-002) 46160415-46170971 protein_coding
ENST00000371383 (ENPP5-001) 46159187-46170971 protein_coding
ENST00000492313 (ENPP5-003) 46164957-46167551 processed_transcript
ENSG00000172348 (RCAN2)
regulator of calcineurin 2 		ENST00000306764 (RCAN2-003) 46220738-46491972 protein_coding
ENST00000330430 (RCAN2-001) 46220736-46325668 protein_coding
ENST00000371374 (RCAN2-002) 46220738-46491362 protein_coding
ENST00000405162 (RCAN2-201) 46221468-46325672 protein_coding
ENSG00000229349 (ACTG1P9)
actin, gamma 1 pseudogene 9 		ENST00000457622 (ACTG1P9-001) 46204729-46207386 processed_pseudogene
ENSG00000231769 (RP1-8B1.4)
 ENST00000437249 (RP1-8B1.4-002) 46102568-46129706 antisense
ENST00000444038 (RP1-8B1.4-001) 46097093-46129591 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0008YF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2397 VISTA 10090 17:43851634-44453524
GeneTranscriptPositionBiotype
ENSMUSG00000023959 (Clic5)
chloride intracellular channel 5 		ENSMUST00000024755 (Clic5-201) 44188572-44280168 protein_coding
ENSMUSG00000023960 (Enpp5)
ectonucleotide pyrophosphatase/phosphodiesterase 5 		ENSMUST00000024756 (Enpp5-002) 44078845-44086559 protein_coding
ENSMUST00000126032 (Enpp5-003) 44078879-44086567 nonsense_mediated_decay
ENSMUST00000154166 (Enpp5-001) 44078813-44086567 protein_coding
ENSMUSG00000023961 (Enpp4)
ectonucleotide pyrophosphatase/phosphodiesterase 4 		ENSMUST00000024757 (Enpp4-001) 44096308-44105809 protein_coding
ENSMUST00000143137 (Enpp4-002) 44096316-44105764 protein_coding
ENSMUSG00000039601 (Rcan2)
regulator of calcineurin 2 		ENSMUST00000044792 (Rcan2-201) 43953191-44039516 protein_coding
ENSMUST00000044895 (Rcan2-202) 43801851-44039516 protein_coding
ENSMUST00000177857 (Rcan2-203) 43952999-44037393 protein_coding
ENSMUSG00000088576 (Gm24532)
predicted gene, 24532 		ENSMUST00000157951 (Gm24532-201) 43961556-43961841 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YF_0001ENSG00000001561ENST00000321037ENSG00000112782ENST00000185206ENST00000339561ENST00000464137ENST00000476852ENST00000484572ENST00000486570ENST00000487396ENST00000544153ENSG00000112796ENST00000230565ENST00000371383ENST00000492313ENSG00000172348ENST00000306764ENST00000330430ENST00000371374ENST00000405162ENSG00000229349ENST00000457622ENSG00000231769ENST00000437249ENST00000444038CIL_0008YF_0002ENSMUSG00000023959ENSMUST00000024755ENSMUSG00000023960ENSMUST00000024756ENSMUST00000126032ENSMUST00000154166ENSMUSG00000023961ENSMUST00000024757ENSMUST00000143137ENSMUSG00000039601ENSMUST00000044792ENSMUST00000044895ENSMUST00000177857ENSMUSG00000088576ENSMUST00000157951
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YF_0001ENSG00000001561ENST00000321037ENSG00000112782ENST00000185206ENST00000339561ENST00000484572ENST00000544153ENSG00000112796ENST00000230565ENST00000371383ENST00000492313ENSG00000172348ENST00000306764ENST00000330430ENST00000371374ENST00000405162ENSG00000229349ENST00000457622ENSG00000231769ENST00000437249ENST00000444038CIL_0008YF_0002ENSMUSG00000023959ENSMUST00000024755ENSMUSG00000023960ENSMUST00000024756ENSMUST00000126032ENSMUST00000154166ENSMUSG00000023961ENSMUST00000024757ENSMUST00000143137ENSMUSG00000039601ENSMUST00000044792ENSMUST00000044895ENSMUST00000177857ENSMUSG00000088576ENSMUST00000157951
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000001561 ENST00000321037 6.248±0.00 3.192±0.00 1.238±0.00 9.717±3.27 5.057±0.00 3.835±1.22 4.131±1.70 5.036±4.07 2.063±0.79 5.339±1.95 2.951±1.63 1.806±0.45 0.800±0.20 3.793±1.03
ENSG00000112782 ENST00000185206 N/A N/A N/A 0.113±0.00 0.966±0.00 N/A N/A N/A 0.028±0.00 N/A N/A 0.157±0.00 N/A 0.360±0.00
ENST00000339561 N/A N/A N/A N/A N/A 1.602±0.00 4.899±0.00 0.027±0.00 0.627±0.00 N/A N/A 0.887±0.00 N/A N/A
ENST00000464137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484572 N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A 1.627±0.00
ENST00000486570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.514±0.00 N/A
ENSG00000112796 ENST00000230565 0.249±0.00 0.398±0.00 2.897±0.00 6.624±0.63 0.567±0.19 0.385±0.00 0.766±0.00 3.267±3.06 0.785±0.67 1.958±0.92 0.255±0.11 1.327±0.74 0.489±0.12 10.045±4.44
ENST00000371383 N/A N/A N/A 1.519±0.73 0.194±0.00 0.298±0.00 0.184±0.01 0.559±0.50 N/A 0.779±0.16 N/A 0.843±0.11 0.199±0.10 4.529±1.58
ENST00000492313 N/A N/A 3.956±0.00 5.704±0.00 1.236±0.00 2.556±0.00 0.476±0.00 N/A 0.974±0.84 3.897±0.00 1.929±0.00 N/A N/A N/A
ENSG00000172348 ENST00000306764 N/A 2.160±0.00 N/A N/A N/A 1.879±0.00 N/A N/A N/A N/A N/A 3.446±0.00 0.632±0.00 2.518±0.00
ENST00000330430 N/A N/A 0.630±0.00 24.491±6.16 2.545±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371374 9.831±0.00 9.607±0.00 2.267±0.00 22.795±12.04 3.464±1.21 6.830±4.65 62.158±49.73 7.096±6.63 4.533±3.70 6.775±5.08 9.064±7.20 4.270±3.22 0.450±0.34 10.153±8.22
ENST00000405162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 0.108±0.04 0.627±0.00
ENSG00000229349 ENST00000457622 0.118±0.00 0.355±0.00 N/A 0.145±0.10 0.232±0.00 0.170±0.00 0.045±0.02 0.218±0.00 0.074±0.01 0.072±0.06 0.020±0.00 0.135±0.00 0.014±0.00 0.142±0.10
ENSG00000231769 ENST00000437249 0.067±0.00 0.241±0.00 N/A N/A 0.279±0.00 0.212±0.00 0.084±0.00 0.503±0.00 0.122±0.00 0.673±0.00 N/A 0.656±0.00 0.388±0.00 0.853±0.39
ENST00000444038 0.131±0.00 0.845±0.00 N/A 0.311±0.00 0.266±0.00 0.085±0.00 0.168±0.00 0.091±0.00 0.077±0.00 0.770±0.00 N/A 0.205±0.10 0.115±0.00 1.029±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023959 ENSMUST00000024755 4.179±1.89 1.941±0.37 3.030±0.26 0.164±0.15 3.782±2.22 13.936±0.86 19.171±0.84 12.244±1.88 0.146±0.07 85.914±3.39 33.930±2.65 1.525±0.59 7.725±6.85 0.141±0.05
ENSMUSG00000023960 ENSMUST00000024756 16.347±6.63 8.997±2.10 25.104±1.17 9.074±2.44 10.781±1.95 10.162±1.40 3.225±1.21 31.931±3.62 4.434±1.46 13.322±2.09 3.015±0.42 7.125±3.49 7.740±5.02 3.398±1.69
ENSMUST00000126032 1.482±0.03 1.133±0.18 5.121±0.39 7.638±0.72 1.486±0.42 1.088±0.09 0.772±0.12 N/A 0.612±0.21 1.978±0.19 0.508±0.07 1.261±0.45 0.852±0.74 0.920±0.40
ENSMUST00000154166 13.130±4.01 2.630±0.65 10.593±2.07 8.036±2.95 7.476±3.57 3.383±1.15 2.528±1.01 20.162±4.65 1.318±0.42 9.017±3.06 N/A 5.110±2.65 2.546±1.68 2.593±0.26
ENSMUSG00000023961 ENSMUST00000024757 4.784±1.44 2.723±0.69 3.945±0.58 0.620±0.19 3.532±1.17 1.978±0.66 3.522±0.65 3.152±0.67 1.288±0.41 6.839±0.47 4.773±1.51 1.573±1.23 0.253±0.02 2.313±1.62
ENSMUST00000143137 2.189±0.80 1.218±0.83 5.381±0.20 1.120±0.65 2.804±1.33 2.147±0.83 2.220±0.45 2.287±0.42 1.476±0.52 5.224±0.89 6.135±1.27 3.098±1.13 0.605±0.14 1.978±0.98
ENSMUSG00000039601 ENSMUST00000044792 0.476±0.00 N/A N/A 4.388±0.00 N/A 0.430±0.07 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000044895 2.319±0.27 2.372±0.46 4.929±0.73 12.011±6.65 2.718±1.08 1.588±0.69 53.333±6.51 4.899±0.63 1.367±1.17 9.172±0.77 10.918±3.06 5.308±1.96 0.208±0.12 0.537±0.17
ENSMUST00000177857 1.793±0.00 N/A N/A 16.688±12.88 N/A 1.000±0.37 N/A 2.529±0.31 0.339±0.10 N/A N/A 1.824±0.00 0.225±0.00 0.243±0.05
ENSMUSG00000088576 ENSMUST00000157951 N/A N/A 0.105±0.03 N/A N/A N/A N/A 0.332±0.00 0.107±0.01 N/A N/A N/A N/A N/A

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