C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307017 USP38-001 ENSG00000170185 9606 + 4:143184945-143223830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307017
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307017 3.096±0.00 2.671±0.00 0.759±0.00 2.246±0.51 1.942±0.80 2.066±0.11 1.635±1.03 3.311±1.93 2.418±1.48 1.318±0.32 2.402±1.25 1.530±0.37 2.056±0.41 2.114±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MQ CIL_0006MQ_0002 CGP 4:143184917-143474568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IDA ubiquitin-specific protease activity
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 IDA protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042724 Usp38-201 protein_coding Mus_musculus 0 4034

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