C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308191 PDE7B-001 ENSG00000171408 9606 + 6:135851696-136195574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308191
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308191 0.297±0.00 0.398±0.00 4.480±0.00 3.701±2.34 0.399±0.16 0.575±0.25 0.957±0.63 0.731±0.16 1.144±1.02 0.433±0.00 0.882±0.00 0.618±0.09 0.098±0.00 0.314±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0001 VISTA 6:135802414-136405223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004115 IEA 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0007268 TAS synaptic transmission
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020165 Pde7b-001 protein_coding Mus_musculus 0 1945
ENSMUST00000170265 Pde7b-006 protein_coding Mus_musculus 0 1607
ENSMUST00000169404 Pde7b-004 protein_coding Mus_musculus 0 1607
ENSMUST00000169016 Pde7b-003 nonsense_mediated_decay Mus_musculus 0 1476
ENSMUST00000164195 Pde7b-005 protein_coding Mus_musculus 0 1435
ENSMUST00000170683 Pde7b-007 retained_intron Mus_musculus 0 477
ENSMUST00000166147 Pde7b-002 retained_intron Mus_musculus 0 342

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