C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L57
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309594 MRPL57-001 ENSG00000173141 9606 + 13:21176645-21179084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309594 4.343±0.00 8.321±0.00 0.747±0.00 4.963±1.67 3.153±2.04 3.537±2.47 4.621±3.60 6.602±4.25 5.009±3.82 2.837±2.03 5.717±2.56 7.254±3.32 8.145±2.56 4.972±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MC CIL_0004MC_0001 CGP 13:21153595-21179084
CIL_0004MB CIL_0004MB_0001 CGP 13:21176645-21459370

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IEA mitochondrion
GO:0005761 IEA mitochondrial ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022538 Mrpl57-201 protein_coding Mus_musculus 0 287
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000002 62

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