C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 6 (HSP70B')
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309758 HSPA6-001 ENSG00000173110 9606 + 1:161524540-161526910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309758
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309758 0.676±0.00 0.975±0.00 0.164±0.00 0.437±0.39 1.432±0.33 1.802±1.63 0.129±0.09 0.297±0.25 0.309±0.18 9.843±7.27 0.484±0.04 1.645±0.97 1.965±0.88 0.936±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005814 IDA centriole
GO:0005829 IDA cytosol
GO:0006200 IDA ATP catabolic process
GO:0006986 TAS response to unfolded protein
GO:0008180 IDA COP9 signalosome
GO:0019899 IPI enzyme binding
GO:0031072 IPI heat shock protein binding
GO:0034605 IDA cellular response to heat
GO:0042026 IDA protein refolding
GO:0042623 IDA ATPase activity, coupled
GO:0051082 IDA unfolded protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087328 Hspa1a-001 protein_coding Mus_musculus 0 1507
ENSMUST00000172753 Hspa1b-001 protein_coding Mus_musculus 0 1507
ENSMUST00000080449 Hspa2-201 protein_coding Mus_musculus 0 1103
ENSMUST00000007248 Hspa1l-001 protein_coding Mus_musculus 0 1090
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 887
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 680
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000153847 Hspa8-006 processed_transcript Mus_musculus 0 470
ENSMUST00000177767 Gm8355-201 processed_pseudogene Mus_musculus 0 363
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 7.00649e-43 180

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