C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310164 ZCCHC12-001 ENSG00000174460 9606 + X:118823790-118826968 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310164
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310164 0.022±0.00 0.125±0.00 7.564±2.01 0.069±0.02 0.336±0.20 0.022±0.00 0.052±0.00 0.107±0.00 0.039±0.00 3.871±3.57 0.185±0.00 1.039±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000715 CIL_000715_0001 CGP X:118727572-118826968
CIL_00071C CIL_00071C_0001 CGP X:118823790-119018355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016607 IBA nuclear speck
GO:0030374 IBA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IBA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115256 Zcchc12-004 protein_coding Mus_musculus 0 1153
ENSMUST00000115257 Zcchc12-003 protein_coding Mus_musculus 0 1153
ENSMUST00000048067 Zcchc12-001 protein_coding Mus_musculus 0 1153
ENSMUST00000115258 Zcchc12-002 protein_coding Mus_musculus 0 1153

Loading