C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin-type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311417 ZMAT3-001 ENSG00000172667 9606 - 3:179017223-179072279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000311417
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000311417 0.286±0.00 3.441±2.72 0.681±0.10 1.293±0.00 0.198±0.00 1.624±0.00 0.430±0.24 2.083±0.00 0.362±0.00 0.575±0.00 1.353±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FI CIL_0001FI_0001 CGP 3:178419123-179072279
CIL_0001FJ CIL_0001FJ_0001 CGP 3:179017223-179240093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0006915 IEA apoptotic process
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0015031 IEA protein transport
GO:0040008 IEA regulation of growth
GO:0043065 IEA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168566 Zmat3-201 protein_coding Mus_musculus 0 894
ENSMUST00000029199 Zmat3-001 protein_coding Mus_musculus 0 894

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