C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: barrier to autointegration factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312175 BANF1-001 ENSG00000175334 9606 + 11:66002079-66004149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312175
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312175 27.754±0.00 44.544±0.00 21.133±18.34 31.998±0.00 39.222±36.67 22.258±0.00 44.794±0.00 12.391±10.74 31.713±0.00 40.776±0.00 70.728±66.35 31.369±7.82 57.045±17.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005694 IEA chromosome
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0007084 TAS mitotic nuclear envelope reassembly
GO:0009615 TAS response to virus
GO:0015074 IEA DNA integration
GO:0016032 TAS viral process
GO:0070062 IDA extracellular vesicular exosome
GO:0075713 TAS establishment of integrated proviral latency

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025762 Banf1-201 protein_coding Mus_musculus 0 610
ENSMUST00000170010 Banf1-202 protein_coding Mus_musculus 0 577

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