C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA replication and sister chromatid cohesion 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313655 DSCC1-001 ENSG00000136982 9606 - 8:119833976-119856010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313655 0.382±0.00 0.812±0.00 0.145±0.00 0.888±0.31 0.654±0.27 0.579±0.23 0.310±0.06 0.342±0.18 0.581±0.42 0.047±0.00 0.399±0.27 7.619±7.73 1.570±1.45 2.719±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T2 CIL_0002T2_0001 CGP 8:119730775-119856010
CIL_000085 CIL_000085_0002 CGP 8:119833976-120050913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IDA chromosome, centromeric region
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 IDA nucleoplasm
GO:0006260 IEA DNA replication
GO:0006275 IMP regulation of DNA replication
GO:0034088 IMP maintenance of mitotic sister chromatid cohesion
GO:0034421 IMP post-translational protein acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023059 Dscc1-001 protein_coding Mus_musculus 0 1164
ENSMUST00000110231 Dscc1-002 protein_coding Mus_musculus 0 710
ENSMUST00000143523 Dscc1-003 retained_intron Mus_musculus 0 265

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