C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm antigen with calponin homology and coiled-coil domains 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314328 SPECC1L-001 ENSG00000100014 9606 + 22:24270840-24417740 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000314328
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000314328 2.144±0.00 3.344±0.00 1.633±0.00 1.379±0.11 1.670±0.82 2.735±0.00 1.264±0.27 4.095±0.00 3.609±0.00 3.121±0.00 3.082±0.55 0.970±0.42 4.178±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z1 CIL_0006Z1_0002 CGP 22:24270817-24442356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005815 IEA microtubule organizing center
GO:0005921 IEA gap junction
GO:0007026 IEA negative regulation of microtubule depolymerization
GO:0007049 IEA cell cycle
GO:0015629 IEA actin cytoskeleton
GO:0015630 IEA microtubule cytoskeleton
GO:0016477 IEA cell migration
GO:0030036 IEA actin cytoskeleton organization
GO:0030835 IEA negative regulation of actin filament depolymerization
GO:0031941 IEA filamentous actin
GO:0046983 IEA protein dimerization activity
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040105 Specc1l-201 protein_coding Mus_musculus 0 4095
ENSMUST00000105421 Specc1l-202 protein_coding Mus_musculus 0 4095
ENSDART00000061912 specc1lb-201 protein_coding Danio_rerio 0 329
ENSDART00000142569 specc1lb-001 protein_coding Danio_rerio 0 329

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