C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 3 open reading frame 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314400 C3orf17-001 ENSG00000163608 9606 - 3:113002440-113019839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314400
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314400 2.844±0.00 1.490±0.00 2.094±0.00 2.427±0.00 1.476±1.15 1.392±0.00 1.215±0.15 1.118±0.00 3.102±0.00 2.806±1.31 1.501±1.05 2.146±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UB CIL_0008UB_0001 VISTA 3:112792647-113397560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0016021 IEA integral component of membrane
GO:0045665 IEA negative regulation of neuron differentiation
GO:0045747 IEA positive regulation of Notch signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048788 BC027231-001 protein_coding Mus_musculus 0 931
ENSMUST00000147804 BC027231-005 nonsense_mediated_decay Mus_musculus 0 235

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