C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ligand of numb-protein X 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316334 LNX2-001 ENSG00000139517 9606 - 13:27545911-27620404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316334
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316334 1.465±0.00 1.187±0.00 1.042±0.47 1.560±0.00 2.350±0.00 1.984±0.00 3.007±0.65 3.301±1.82 3.913±0.91 1.822±0.92 5.774±2.97 1.254±0.09 6.814±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M9 CIL_0004M9_0001 CGP 13:27435643-27620404
CIL_0008CO CIL_0008CO_0001 VISTA 13:27444442-28045997
CIL_0007MT CIL_0007MT_0001 UCNEbase 13:27505095-28294517
CIL_00082E CIL_00082E_0001 VISTA 13:27521824-28123399
CIL_0004M8 CIL_0004M8_0001 CGP 13:27545911-27667422

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0030165 IEA PDZ domain binding
GO:0046872 IEA metal ion binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016664 Lnx2-001 protein_coding Mus_musculus 0 1609

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