C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early growth response 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095759 Egr4-201 ENSMUSG00000071341 10090 - 6:85511131-85513589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000095759
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000095759 0.014±0.00 0.013±0.00 0.014±0.00 1.694±2.35 0.028±0.01 0.011±0.00 0.004±0.00 0.009±0.00 0.081±0.03 0.021±0.01 2.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0002 VISTA 6:84918005-85518946
CIL_0003EJ CIL_0003EJ_0002 CGP 6:85469574-85513589
CIL_0003EB CIL_0003EB_0002 CGP 6:85511131-85702753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043066 IBA negative regulation of apoptotic process
GO:0046872 IEA metal ion binding
GO:0071320 IBA cellular response to cAMP
GO:0071371 IBA cellular response to gonadotropin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110381 EGR4 (1 of 2)-001 protein_coding Danio_rerio 0 268
ENST00000239938 EGR1-001 protein_coding Homo_sapiens 0 224
ENST00000317216 EGR3-001 protein_coding Homo_sapiens 0 209
ENST00000436467 EGR4-001 protein_coding Homo_sapiens 0 1696
ENST00000519492 EGR3-002 protein_coding Homo_sapiens 0 209
ENST00000522910 EGR3-003 protein_coding Homo_sapiens 0 209
ENST00000524088 EGR3-004 processed_transcript Homo_sapiens 0 209
ENST00000545030 EGR4-201 protein_coding Homo_sapiens 0 1696

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