C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small EDRK-rich factor 1A (telomeric)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317633 SERF1A-001 ENSG00000172058 9606 + 5:70900665-70908375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317633
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317633 0.012±0.00 0.146±0.00 0.186±0.04 0.206±0.00 0.206±0.00 0.078±0.00 0.176±0.00 0.029±0.00 0.208±0.09 0.094±0.00 0.059±0.02 0.073±0.02 0.257±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZD CIL_0004ZD_0001 CGP 5:70900665-70953942

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007399 TAS nervous system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022145 Serf1-001 protein_coding Mus_musculus 0 425
ENSMUST00000142155 Serf1-003 protein_coding Mus_musculus 0 418
ENSMUST00000151821 Serf1-004 protein_coding Mus_musculus 0 390
ENSMUST00000152286 Serf1-005 protein_coding Mus_musculus 0 387
ENSMUST00000129014 Serf1-006 protein_coding Mus_musculus 0 324
ENSMUST00000132053 Serf1-002 protein_coding Mus_musculus 1.96182e-44 183

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