C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbonic anhydrase VB, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318636 CA5B-005 ENSG00000169239 9606 + X:15738270-15787624 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000318636
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000318636 1.226±0.00 0.853±0.00 0.709±0.55 1.268±0.00 0.271±0.00 0.741±0.00 1.894±0.00 0.082±0.00 0.762±0.00 0.328±0.00 0.917±0.27 1.292±0.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004089 IEA carbonate dehydratase activity
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006730 IEA one-carbon metabolic process
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0015701 TAS bicarbonate transport
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033739 Car5b-001 protein_coding Mus_musculus 0 1136
ENSMUST00000146827 Nrf1-011 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115199 Nrf1-010 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000148990 Nrf1-009 processed_transcript Mus_musculus 0.00000000002 77
ENSMUST00000115204 Nrf1-007 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115200 Nrf1-015 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000133928 Nrf1-016 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115206 Nrf1-004 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000146988 Nrf1-003 retained_intron Mus_musculus 0.00000000002 77
ENSMUST00000115211 Nrf1-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000123194 Nrf1-008 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115212 Nrf1-001 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000001 68

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