C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318948 NRIP1-201 ENSG00000180530 9606 - 21:14961235-15064805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000318948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000318948 3.585±0.00 1.012±0.00 3.513±0.00 3.557±0.20 3.932±2.48 4.090±2.93 0.714±0.00 4.542±3.43 4.799±0.00 4.384±0.48 3.036±1.85 1.370±0.91 1.806±0.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001046 IDA core promoter sequence-specific DNA binding
GO:0003713 IDA transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007623 IEP circadian rhythm
GO:0030054 IDA cell junction
GO:0030331 IPI estrogen receptor binding
GO:0030521 NAS androgen receptor signaling pathway
GO:0032922 IMP circadian regulation of gene expression
GO:0035257 IPI nuclear hormone receptor binding
GO:0035259 IPI glucocorticoid receptor binding
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0050681 NAS androgen receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121927 Nrip1-001 protein_coding Mus_musculus 0 4313
ENSMUST00000054178 Nrip1-003 protein_coding Mus_musculus 0 3489
ENSMUST00000140483 Nrip1-006 protein_coding Mus_musculus 0.0000000001 75

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