Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	nuclear receptor interacting protein 1
ENSMUST00000054178	Nrip1-003	ENSMUSG00000048490	10090	-	16:76290862-76373049	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Ovary	Placenta	Testis
ENSMUST00000054178	3.530±0.32	2.409±0.00	1.414±0.00	1.179±0.45	2.135±0.89	0.741±0.22	1.265±0.44	0.552±0.21	1.002±0.18	2.842±1.16	3.139±1.44	0.866±0.16

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00031Y	CIL_00031Y_0002	CGP	16:75858793-76373827

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000118	IPI	histone deacetylase complex
GO:0000122	IDA	negative regulation of transcription from RNA polymerase II promoter
GO:0001046	ISS	core promoter sequence-specific DNA binding
GO:0001543	IMP	ovarian follicle rupture
GO:0003713	IDA	transcription coactivator activity
GO:0003714	IDA	transcription corepressor activity
GO:0005102	IPI	receptor binding
GO:0005515	IPI	protein binding
GO:0005634	IDA	nucleus
GO:0006351	IEA	transcription, DNA-templated
GO:0006357	IDA	regulation of transcription from RNA polymerase II promoter
GO:0016607	IDA	nuclear speck
GO:0019915	IMP	lipid storage
GO:0030728	IMP	ovulation
GO:0032922	IMP	circadian regulation of gene expression
GO:0042826	IPI	histone deacetylase binding
GO:0042974	IPI	retinoic acid receptor binding
GO:0046965	IPI	retinoid X receptor binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000318948	NRIP1-201	protein_coding	Homo_sapiens	0	3489
ENST00000400199	NRIP1-001	protein_coding	Homo_sapiens	0	3489
ENST00000400202	NRIP1-002	protein_coding	Homo_sapiens	0	3489
ENST00000411932	NRIP1-004	protein_coding	Homo_sapiens	0	292

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