C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nuclear receptor interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054178 Nrip1-003 ENSMUSG00000048490 10090 - 16:76290862-76373049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000054178
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000054178 3.530±0.32 2.409±0.00 1.414±0.00 1.179±0.45 2.135±0.89 0.741±0.22 1.265±0.44 0.552±0.21 1.002±0.18 2.842±1.16 3.139±1.44 0.866±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031Y CIL_00031Y_0002 CGP 16:75858793-76373827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IPI histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001046 ISS core promoter sequence-specific DNA binding
GO:0001543 IMP ovarian follicle rupture
GO:0003713 IDA transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0005102 IPI receptor binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0016607 IDA nuclear speck
GO:0019915 IMP lipid storage
GO:0030728 IMP ovulation
GO:0032922 IMP circadian regulation of gene expression
GO:0042826 IPI histone deacetylase binding
GO:0042974 IPI retinoic acid receptor binding
GO:0046965 IPI retinoid X receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318948 NRIP1-201 protein_coding Homo_sapiens 0 3489
ENST00000400199 NRIP1-001 protein_coding Homo_sapiens 0 3489
ENST00000400202 NRIP1-002 protein_coding Homo_sapiens 0 3489
ENST00000411932 NRIP1-004 protein_coding Homo_sapiens 0 292

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