C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome X open reading frame 56
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320339 CXorf56-003 ENSG00000018610 9606 - X:119538149-119565373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryTestisENST00000320339
Transcript ID Adrenal Breast Colon Ovary Testis
ENST00000320339 1.936±0.00 1.406±0.00 0.510±0.00 1.334±0.33 1.238±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UI CIL_0001UI_0001 CGP X:119468400-119565434
CIL_0004S7 CIL_0004S7_0001 CGP X:119538149-119584418

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115248 C330007P06Rik-201 protein_coding Mus_musculus 0 797
ENSMUST00000047486 C330007P06Rik-001 protein_coding Mus_musculus 0 797
ENSMUST00000062242 Gm8181-201 processed_pseudogene Mus_musculus 0 782
ENSMUST00000115249 C330007P06Rik-002 protein_coding Mus_musculus 0 697
ENSMUST00000127966 C330007P06Rik-005 retained_intron Mus_musculus 0 470
ENSMUST00000143544 C330007P06Rik-003 processed_transcript Mus_musculus 0 263
ENSMUST00000150873 C330007P06Rik-004 retained_intron Mus_musculus 0 230
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 58

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